Detailed information NTG0148824

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: AB870_RS02530
• Genome accession: NZ_CP011807
• Coordinates: 555755..556948 (-)
• Length: 397 a.a.
• NCBI ID: WP_157112423.1
• Uniprot ID: -
• Organism: Pandoraea faecigallinarum strain DSM 23572
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 550755..561948

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB870_RS02505 (AB870_14005)	rpoH	551364..552212 (-)	849	WP_237170105.1	RNA polymerase sigma factor RpoH	-
AB870_RS02510 (AB870_14010)	-	552525..552908 (+)	384	WP_047906809.1	nuclear transport factor 2 family protein	-
AB870_RS02515 (AB870_14015)	ybiB	553147..554103 (-)	957	WP_047906810.1	DNA-binding protein YbiB	-
AB870_RS02520 (AB870_14020)	maiA	554326..554982 (+)	657	WP_047908711.1	maleylacetoacetate isomerase	-
AB870_RS02525 (AB870_14025)	-	554979..555605 (+)	627	WP_047906811.1	LysE/ArgO family amino acid transporter	-
AB870_RS02530 (AB870_14030)	pilA	555755..556948 (-)	1194	WP_157112423.1	signal recognition particle-docking protein FtsY	Machinery gene
AB870_RS02535 (AB870_14035)	-	557426..558853 (+)	1428	WP_418303982.1	M16 family metallopeptidase	-
AB870_RS02540 (AB870_14040)	-	558867..560309 (+)	1443	WP_053059536.1	M16 family metallopeptidase	-
AB870_RS02545 (AB870_14045)	-	560389..561171 (-)	783	WP_269466246.1	ABC transporter permease	-

Sequence

Protein

• Length: 397 a.a.
• Molecular weight: 41282.51 Da
• Isoelectric Point: 4.8912

>NTDB_id=148824 AB870_RS02530 WP_157112423.1 555755..556948(-) (pilA) [Pandoraea faecigallinarum strain DSM 23572]
MREAPGAPGAPITSAPAPQVTPAPVDLTSATSGQAVAPVEAVEAVEAVEAVEAVETIEAVEPAQAPEPVAPPPAPVVVKD
SDGEVIGEIVSAPAPAPAAKRSWLTRLKAGLSKTSAGLTGIFVGVRVDENLFEELEGALLMSDAGVEATTYLLDALRKKV
KAERLTEGAQVKRALHDLLVELLQPLEQSLVLGREAPLVVMIAGVNGAGKTTSIGKLAKHFQHYGQSVLLAAGDTFRAAA
REQLAIWGERNNVAVVAQESGDPAAVVFDAVSAARARKIDIVMADTAGRLPTQLHLMEELKKIKRVLGKAADGAPHEVLL
VIDANTGQNALAQVKAFDDALKLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAREFADALLG

Nucleotide

• Length: 1194 bp

>NTDB_id=148824 AB870_RS02530 WP_157112423.1 555755..556948(-) (pilA) [Pandoraea faecigallinarum strain DSM 23572]
ATGCGGGAAGCGCCGGGAGCGCCAGGAGCACCGATTACGTCCGCCCCGGCGCCGCAAGTAACGCCCGCGCCGGTGGACCT
CACGTCCGCCACGTCGGGCCAGGCCGTTGCCCCCGTCGAAGCCGTCGAAGCCGTCGAAGCCGTCGAAGCCGTCGAAGCTG
TCGAAACCATCGAAGCCGTCGAACCGGCGCAGGCGCCAGAACCCGTCGCGCCGCCCCCGGCTCCCGTCGTCGTCAAGGAC
TCGGATGGCGAAGTTATCGGCGAGATCGTTTCCGCCCCTGCACCGGCACCGGCGGCCAAGCGTTCGTGGCTCACCCGCCT
GAAGGCCGGTCTGTCGAAGACGAGCGCAGGTCTCACGGGCATTTTCGTCGGCGTGAGGGTCGATGAGAATCTGTTCGAAG
AACTCGAAGGCGCGCTGCTGATGAGCGACGCCGGTGTGGAAGCCACCACCTATCTGCTCGACGCACTGCGCAAGAAGGTC
AAGGCCGAACGGCTGACGGAGGGCGCGCAGGTCAAGCGCGCACTGCACGACCTGCTGGTCGAGTTGCTGCAACCGCTGGA
GCAAAGCCTCGTGCTCGGGCGCGAAGCGCCGCTGGTCGTGATGATCGCAGGCGTGAACGGTGCCGGGAAGACAACCAGCA
TCGGCAAGCTCGCCAAGCACTTCCAGCACTACGGGCAATCCGTGCTGCTCGCCGCCGGCGACACGTTCCGCGCGGCCGCC
CGCGAGCAGCTGGCCATCTGGGGCGAACGTAACAACGTTGCCGTCGTTGCGCAGGAAAGCGGCGATCCGGCCGCTGTCGT
GTTCGACGCCGTGAGCGCCGCTCGCGCCCGCAAGATCGACATCGTGATGGCAGACACGGCAGGCCGTCTGCCCACGCAGT
TGCATCTGATGGAAGAACTCAAGAAGATCAAGCGCGTGCTGGGCAAGGCCGCCGACGGTGCGCCGCACGAAGTTCTGCTG
GTCATCGACGCCAACACCGGCCAGAACGCGCTCGCGCAGGTCAAGGCGTTCGACGACGCGCTCAAACTTACCGGCCTTAT
CGTGACAAAGCTCGACGGCACCGCCAAGGGCGGAATCCTCGCGGCGATTGCCCGTCAGCGGCCGGTGCCCGTGTATTTCA
TCGGCGTGGGCGAAAAGGTCGAAGATCTGCAACCGTTCTCGGCACGCGAATTCGCCGACGCGCTTCTGGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (118-177)

• SRP54-type protein, GTPase domain (SRP54) (198-397)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	56.915	94.71	0.539