Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AB688_RS25830 Genome accession   NZ_CP011789
Coordinates   5785305..5785706 (-) Length   133 a.a.
NCBI ID   WP_063546904.1    Uniprot ID   A0AAD0LC43
Organism   Pseudomonas putida strain PC2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5780305..5790706
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB688_RS25815 (AB688_25840) - 5782269..5784290 (-) 2022 WP_370671316.1 methyl-accepting chemotaxis protein -
  AB688_RS25820 (AB688_25845) - 5784341..5784895 (-) 555 WP_054894837.1 chemotaxis protein CheW -
  AB688_RS25825 (AB688_25850) pilH 5784892..5785257 (-) 366 WP_012274551.1 twitching motility response regulator PilH -
  AB688_RS25830 (AB688_25855) pilG 5785305..5785706 (-) 402 WP_063546904.1 response regulator Regulator
  AB688_RS25835 (AB688_25860) gshB 5785902..5786855 (+) 954 WP_063546552.1 glutathione synthase -
  AB688_RS25840 (AB688_25865) - 5786945..5787844 (+) 900 WP_063546554.1 energy transducer TonB -
  AB688_RS25845 (AB688_25870) - 5787939..5788508 (+) 570 WP_054894840.1 YqgE/AlgH family protein -
  AB688_RS25850 (AB688_25875) ruvX 5788508..5788933 (+) 426 WP_054894841.1 Holliday junction resolvase RuvX -
  AB688_RS25855 (AB688_25880) pyrR 5788980..5789498 (+) 519 WP_054894842.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  AB688_RS25860 (AB688_25885) - 5789511..5790515 (+) 1005 WP_054894843.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14758.14 Da        Isoelectric Point: 6.8628

>NTDB_id=148687 AB688_RS25830 WP_063546904.1 5785305..5785706(-) (pilG) [Pseudomonas putida strain PC2]
MEQPLKVMVIDDSRTIRRTAQMLLGEVGCEVITASDGFDALAKIVDHKPRIIFVDVLMPRLDGYQTCAVIKHNSAFKDIP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPEFAAQAQHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=148687 AB688_RS25830 WP_063546904.1 5785305..5785706(-) (pilG) [Pseudomonas putida strain PC2]
ATGGAACAGCCCCTGAAGGTGATGGTGATCGACGATTCCCGCACCATCCGCCGCACCGCCCAGATGCTGCTGGGCGAGGT
GGGTTGCGAGGTGATCACCGCCAGCGACGGTTTCGATGCCCTGGCCAAGATCGTCGATCACAAGCCGCGGATCATCTTCG
TCGATGTACTGATGCCGCGTCTGGACGGTTACCAGACCTGCGCAGTGATCAAGCACAACAGTGCGTTCAAGGATATCCCG
GTGATCCTGCTGTCGTCGCGTGACGGCCTGTTCGACAAGGCCCGCGGCCGGGTGGTCGGCTCCGATCAGTTCCTCACCAA
ACCGTTCAGCAAGGAAGAACTGCTCGACGCGATCCGTGCCCACGTGCCCGAATTCGCCGCGCAGGCACAACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70.833

90.226

0.639

Multiple sequence alignment