Detailed information NTG0148643

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: FORC16_RS13185
• Genome accession: NZ_CP011775
• Coordinates: 2901426..2902433 (+)
• Length: 335 a.a.
• NCBI ID: WP_011079334.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain FORC_016
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2896426..2907433

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC16_RS13165 (FORC16_2584)	metJ	2896531..2896848 (+)	318	WP_011079338.1	met regulon transcriptional regulator MetJ	-
FORC16_RS13170 (FORC16_2585)	-	2896935..2898212 (-)	1278	WP_011079337.1	malic enzyme-like NAD(P)-binding protein	-
FORC16_RS13175 (FORC16_2586)	rpmE	2898491..2898712 (-)	222	WP_011079336.1	50S ribosomal protein L31	-
FORC16_RS13180 (FORC16_2587)	priA	2898993..2901197 (+)	2205	WP_060530649.1	primosomal protein N'	-
FORC16_RS13185 (FORC16_2588)	cytR	2901426..2902433 (+)	1008	WP_011079334.1	DNA-binding transcriptional regulator CytR	Regulator
FORC16_RS13190 (FORC16_2589)	-	2902543..2903100 (+)	558	WP_045620694.1	SPOR domain-containing protein	-
FORC16_RS13195 (FORC16_2590)	hslV	2903251..2903805 (+)	555	WP_011079332.1	ATP-dependent protease subunit HslV	-
FORC16_RS13200 (FORC16_2591)	hslU	2903833..2905164 (+)	1332	WP_011079331.1	HslU--HslV peptidase ATPase subunit	-
FORC16_RS13205 (FORC16_2592)	-	2905330..2906247 (+)	918	WP_060530648.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
FORC16_RS13210 (FORC16_2593)	rraA	2906323..2906844 (+)	522	WP_011079329.1	ribonuclease E activity regulator RraA	-
FORC16_RS13215 (FORC16_2594)	zapB	2907066..2907308 (+)	243	WP_011079328.1	cell division protein ZapB	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36842.38 Da
• Isoelectric Point: 6.4904

>NTDB_id=148643 FORC16_RS13185 WP_011079334.1 2901426..2902433(+) (cytR) [Vibrio vulnificus strain FORC_016]
MATMKDVAQLAGVSTATVSRALMNPDKVSATTRKRVEDAVLEAGYSPNSLARNLRRNESRTIVAIVPDICDPYYTEIIRG
IEDAAIEQGYLVLLGDSGQQKRRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPDLELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPKSAALCQFRQQGYQQALRRAGITMNPQYCVESEFSFEGGAKAIRHLLEMNDAPTA
VFCHCDTMAIGAIQEAKKLGFRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDIHSGSRLLE
TKLVVRGSAAPPGLR

Nucleotide

• Length: 1008 bp

>NTDB_id=148643 FORC16_RS13185 WP_011079334.1 2901426..2902433(+) (cytR) [Vibrio vulnificus strain FORC_016]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGAGTTTCAACGGCAACGGTTTCGAGAGCGCTGATGAATCCAGACAA
AGTATCCGCCACAACGCGTAAGCGTGTGGAAGATGCGGTGTTGGAAGCTGGTTATTCCCCAAATTCGCTGGCACGCAATT
TACGCCGCAACGAGTCACGCACTATCGTCGCGATCGTTCCTGACATTTGTGATCCTTACTACACAGAGATCATTCGTGGC
ATTGAAGATGCCGCCATTGAACAGGGATATTTGGTTCTACTCGGTGACAGCGGCCAACAAAAGCGCCGTGAAAGCTCACT
CGTCAATCTCGTTTTTACCAAGCAAGCGGATGGTATGCTGTTGCTCGGTACCGACTTACCGTTTGATGTGAGCAAGCCAG
AACAGAAAAATCTTCCTCCGATGGTCATGGCTTGCGAGTTCGCCCCCGATCTCGAACTGCCGACGGTTCATATCGATAAC
TTGACCTCAGCATTTGAAGCGGTGAACTACCTGACCCAATTGGGCCACAAACGCATCGCCCAAATTTCAGGGCCAAAATC
CGCAGCACTTTGTCAGTTTAGACAACAAGGCTATCAACAAGCTTTGCGCCGTGCAGGCATCACAATGAACCCACAATACT
GTGTTGAGTCTGAGTTCTCTTTTGAAGGTGGGGCGAAAGCGATCCGTCATCTGCTAGAAATGAATGACGCGCCAACCGCC
GTTTTCTGCCATTGTGACACCATGGCTATCGGGGCGATTCAAGAAGCGAAAAAATTGGGCTTCCGAGTACCGCAAGATCT
GTCGATTGTCGGCTTCGATGACATTCAGTTTGCCCAATATTGCGATCCTCCGCTAACCACCATCTCACAGCCACGCTATG
AGATTGGTCGTCAAGCGATGCTGATGATGTTAGAGCTGCTGAAAGGACATGACATTCACAGTGGCTCACGCTTACTTGAA
ACCAAATTGGTGGTTCGTGGTAGCGCAGCGCCTCCAGGCTTACGCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	89.759	99.104	0.89
cytR	Vibrio cholerae C6706	88.253	99.104	0.875