Detailed information NTG0148624

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: FORC16_RS11705
• Genome accession: NZ_CP011775
• Coordinates: 2583264..2586653 (+)
• Length: 1129 a.a.
• NCBI ID: WP_060530824.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain FORC_016
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2578264..2591653

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC16_RS11685 (FORC16_2324)	erpA	2578663..2579004 (-)	342	WP_026130638.1	iron-sulfur cluster insertion protein ErpA	-
FORC16_RS11690 (FORC16_2325)	hemL	2579291..2580586 (+)	1296	WP_011079597.1	glutamate-1-semialdehyde 2,1-aminomutase	-
FORC16_RS11695 (FORC16_2326)	-	2580836..2581921 (+)	1086	WP_011151094.1	AI-2E family transporter	-
FORC16_RS11700 (FORC16_2327)	rsmC	2581995..2583017 (+)	1023	WP_060530826.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
FORC16_RS11705 (FORC16_2328)	chiS	2583264..2586653 (+)	3390	WP_060530824.1	response regulator	Regulator
FORC16_RS11710 (FORC16_2329)	-	2587594..2589267 (+)	1674	WP_045618650.1	ABC transporter substrate-binding protein	-
FORC16_RS11715 (FORC16_2330)	-	2589436..2590422 (+)	987	WP_011079592.1	ABC transporter permease	-
FORC16_RS11720 (FORC16_2331)	-	2590425..2591450 (+)	1026	WP_011079591.1	ABC transporter permease	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127535.48 Da
• Isoelectric Point: 5.8196

>NTDB_id=148624 FORC16_RS11705 WP_060530824.1 2583264..2586653(+) (chiS) [Vibrio vulnificus strain FORC_016]
MFKFYRKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQILDYFQAQETEVMGFVRS
ELAYASGGRFYGLVNAFKSLGVDMEQARENAQQRYIQGSGDQIKTSILPESSSFVGSERYRLLHKRYHWAYLELLKRSDF
DDILLVDLDGNVTYSIYKNENFGTNLIEGPFKESMLGKSFRQLANDVSEKRKQNEDYTPVYISDFSVEDGKQVAWLGAPI
IQQGYLHSYAMFRLPNNGITKLIADINKDAAIHTLLVGSDHLPRTMTTKQTDIESSIEVVDKALAELTDVGTYINSSGEA
TIAAYAPISFKGQTWALVVQLPEKEAFARIHQLEKLFVIAMLIAIVLVFISSHYLSNFITSPLLKLTWAAERVSAGDLDE
NMINTERKDEIGRLAISFERMQRSIRDKIQLIKTQNAELEKNLQLIQKQNDELQLADKLKDEFLATTSHELRTPLHGMIG
IAETLISGANGPLPSNQRYQLDIIIKSGQRLATLVDDLLDYHKMRYGSLDIQKSAVNLASATRLVLELSHHLLGNKTLRI
INQVSNDVAPVSADPQRLEQVLYNLIGNAIKYTTEGKIVISANVVDDKVRVQVVDTGQGIPAEQLEHIFEPLIQAGRDSG
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASADEISATEVMQNQHHFQAPDSNELISLDNSSLPENP
NGPLLIVADDEPVNLRVLESFLRIEGYRVQTASDGPDTLELIEHEKPALLLLDIMMPGMSGYQVCHQLRQQYDMAELPII
MLTALSQSEDRVRGFEAGANDYLTKPFNKQELAARIKAHLMASKAEARRLENNRLEAELRQRAMVEASLLETQGRLLEQL
ESAPEAIICIREDKRIRFANDAACKLFKRSLEQLKRSNAEELIAPKYLTVKQQHYCGNIDIYVDDVRQHIETDILKLPEG
SGLDAMFIFNVGGGAAASRVHNLETAVEVLSSYAFDGDKERLQSLKELGGEFTRLADKALGTNKNKQELMREVLVDLMTH
ALDYWESVTGENKFTFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEYILDHCKEQSPERTYIEMQR
DKLQRLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=148624 FORC16_RS11705 WP_060530824.1 2583264..2586653(+) (chiS) [Vibrio vulnificus strain FORC_016]
ATGTTTAAGTTTTATCGCAAACAGAAGTTTAAACGCCTTCAAAGCACTCTGATGACTGCGTTTTTGGTGCTGAGTATCAC
GCCATTAACCATCACAGCGATTTTCTTTTTGCAATCACACAGTAAAGATCTCCAAGAACAGAGCACTTCTCACCTGCTTT
CTGTACGAGACACCAAACAACAACAGATCCTGGATTATTTCCAAGCACAAGAAACAGAAGTGATGGGATTTGTTCGTTCA
GAGTTGGCTTACGCGAGTGGTGGCCGATTTTACGGGCTTGTCAACGCCTTCAAAAGCTTAGGCGTGGATATGGAACAGGC
TCGAGAAAACGCTCAACAGCGCTATATTCAGGGGTCTGGCGATCAAATAAAAACGTCGATTTTGCCGGAATCCAGCTCTT
TTGTTGGTAGTGAACGCTACCGTTTACTGCATAAGCGCTATCACTGGGCCTATTTGGAGCTTTTGAAGCGCTCCGATTTT
GACGATATTTTGTTGGTGGATCTCGATGGCAACGTCACCTACTCCATCTACAAAAATGAAAACTTTGGCACAAACTTAAT
TGAAGGGCCTTTTAAAGAGAGCATGCTCGGTAAAAGCTTTCGTCAGTTGGCCAATGACGTCAGCGAAAAACGCAAGCAAA
ACGAAGACTATACCCCCGTCTATATTTCCGACTTCTCGGTTGAAGATGGCAAACAAGTCGCTTGGTTGGGTGCACCGATC
ATCCAGCAAGGCTATCTGCACAGCTACGCCATGTTCAGGCTACCCAACAATGGCATCACCAAACTGATTGCAGACATCAA
TAAAGATGCAGCTATCCACACTTTGCTGGTTGGAAGTGACCACTTACCTCGCACGATGACCACAAAGCAAACCGATATCG
AAAGCAGTATTGAAGTGGTCGATAAGGCACTCGCGGAACTGACGGATGTGGGGACTTATATCAACAGCAGCGGTGAGGCG
ACCATCGCCGCCTATGCGCCAATTTCATTCAAAGGTCAAACCTGGGCTTTAGTGGTTCAGTTGCCGGAGAAAGAAGCGTT
TGCACGCATTCATCAGTTAGAAAAACTGTTCGTCATCGCTATGTTGATTGCAATCGTGCTGGTGTTTATCTCATCTCACT
ACTTATCGAATTTCATCACCTCACCACTACTCAAACTCACTTGGGCTGCAGAGCGCGTTTCTGCAGGTGATCTCGATGAA
AACATGATTAATACCGAACGCAAAGACGAAATTGGCCGTTTAGCGATCAGTTTTGAACGAATGCAACGCTCTATTCGCGA
TAAAATTCAGCTCATTAAAACGCAAAATGCGGAGCTAGAGAAAAATCTACAACTGATTCAAAAGCAAAATGACGAATTGC
AATTGGCCGATAAGCTCAAAGATGAATTTTTGGCGACGACCTCTCATGAGCTACGCACTCCACTGCATGGCATGATTGGT
ATTGCAGAAACCCTCATCTCAGGGGCAAACGGCCCACTGCCCTCTAACCAGCGCTATCAACTGGACATTATTATTAAGAG
TGGCCAGCGCTTAGCTACGCTTGTGGATGACTTGCTTGACTACCACAAAATGCGCTATGGCAGTTTGGATATTCAAAAGT
CTGCCGTCAATTTGGCCAGTGCAACTCGACTGGTATTAGAGCTCTCTCACCATTTATTGGGCAACAAAACTCTGCGCATC
ATTAATCAGGTTTCTAACGATGTTGCGCCGGTATCTGCCGATCCACAGCGATTAGAACAGGTGCTGTATAACCTTATTGG
CAACGCGATCAAATACACCACTGAAGGGAAAATCGTCATTTCCGCCAATGTGGTTGACGATAAAGTTCGAGTGCAAGTCG
TCGATACCGGCCAAGGCATTCCCGCAGAACAGTTAGAGCATATTTTCGAACCGCTCATTCAAGCTGGTCGCGACTCTGGT
CGTTATCGCCAAGGTGCCGGTCTGGGACTTTCCATTAGCCGTCAGCTGATCGAGTTAATGGGAGGATCGCTCTACGTCAG
CAGTCAACCCATGGTTGGCACCACCTTTAGCTTCACCTTGCCATTGGCCAGCGCAGACGAAATCAGTGCCACGGAAGTCA
TGCAAAATCAACATCACTTCCAAGCGCCAGATAGCAATGAATTGATCTCATTAGATAATTCATCACTGCCAGAAAATCCC
AATGGTCCGCTACTGATTGTGGCCGATGATGAACCCGTCAACTTACGCGTGCTTGAAAGTTTCCTACGCATCGAAGGGTA
CCGAGTGCAAACGGCCTCAGATGGCCCAGACACTCTCGAACTCATTGAACATGAAAAACCCGCCTTGCTGTTGCTCGACA
TCATGATGCCGGGCATGAGCGGTTATCAAGTTTGCCATCAACTCCGACAGCAATACGACATGGCAGAATTGCCTATTATC
ATGCTAACGGCGTTGAGTCAGAGCGAAGATCGCGTGCGAGGATTCGAAGCTGGAGCCAATGATTACTTAACCAAACCATT
TAATAAGCAAGAGCTTGCGGCCCGAATTAAAGCACATTTAATGGCAAGTAAAGCAGAAGCTCGTCGCTTGGAAAACAATC
GCCTTGAAGCAGAGCTTCGCCAACGTGCAATGGTGGAAGCAAGCTTACTGGAAACACAAGGGCGTTTATTAGAACAATTG
GAATCGGCCCCAGAAGCCATTATCTGTATTCGTGAAGATAAGCGTATTCGCTTTGCCAATGACGCGGCCTGTAAACTGTT
CAAACGCAGCTTAGAGCAGCTCAAGCGCTCAAACGCAGAAGAACTTATTGCACCCAAATATTTAACTGTCAAACAGCAGC
ACTATTGCGGCAATATCGATATCTATGTCGACGATGTTCGACAGCATATTGAAACGGATATCCTTAAACTACCAGAAGGG
TCTGGCCTTGATGCGATGTTTATCTTTAATGTCGGGGGAGGCGCAGCTGCTTCTCGTGTGCACAACCTAGAAACCGCCGT
AGAAGTCCTTTCAAGCTATGCCTTTGATGGTGATAAAGAGCGCTTACAGAGTCTCAAAGAGCTAGGGGGAGAATTTACTC
GCCTAGCCGACAAAGCGCTGGGTACCAATAAGAATAAGCAAGAGCTGATGCGTGAAGTCCTCGTGGATTTGATGACGCAT
GCACTCGATTATTGGGAGTCAGTGACAGGTGAAAACAAATTTACCTTTGCTGAACAAAGTGGTTTATGGCGTGTTTATCT
CGACCGCAGCACGCTACAAACTCGCACACTTGATAAATACATGCGAATTGAAACCTTGCCAAAAACGCCGCGTTGGAGAA
CCGTGTTGAGTTCTATTGAGTACATTCTGGACCACTGTAAAGAGCAAAGCCCTGAGCGTACTTACATTGAGATGCAGCGA
GATAAATTACAACGCCTGCTCACCAGCTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (726-837)

• HAMP domain (HAMP) (375-427)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• PAS fold (PAS) (877-926)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	77.059	100	0.771