Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | AYR69_RS15320 | Genome accession | NZ_CP014540 |
| Coordinates | 3230009..3230524 (+) | Length | 171 a.a. |
| NCBI ID | WP_000477151.1 | Uniprot ID | V5VA61 |
| Organism | Acinetobacter baumannii strain XH857 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3225009..3235524
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYR69_RS15300 (AYR69_15300) | - | 3225337..3226797 (+) | 1461 | WP_000004971.1 | amino acid permease | - |
| AYR69_RS15305 (AYR69_15305) | - | 3227074..3228279 (+) | 1206 | WP_005127974.1 | RtcB family protein | - |
| AYR69_RS19280 (AYR69_15310) | - | 3228298..3228441 (+) | 144 | WP_162138624.1 | hypothetical protein | - |
| AYR69_RS15315 (AYR69_15315) | omp38 | 3228566..3229627 (-) | 1062 | WP_005127972.1 | outer membrane protein Omp38 | - |
| AYR69_RS15320 (AYR69_15320) | fimT | 3230009..3230524 (+) | 516 | WP_000477151.1 | GspH/FimT family pseudopilin | Machinery gene |
| AYR69_RS15325 (AYR69_15325) | - | 3230633..3231808 (+) | 1176 | WP_000129968.1 | thiolase family protein | - |
| AYR69_RS15330 (AYR69_15330) | - | 3231935..3232378 (+) | 444 | WP_001176580.1 | VOC family protein | - |
| AYR69_RS15335 (AYR69_15335) | - | 3232421..3232774 (-) | 354 | WP_000457779.1 | DMT family transporter | - |
| AYR69_RS15340 (AYR69_15340) | - | 3232856..3233341 (-) | 486 | WP_000935248.1 | DUF934 domain-containing protein | - |
| AYR69_RS15345 (AYR69_15345) | - | 3233334..3234977 (-) | 1644 | WP_000281766.1 | nitrite/sulfite reductase | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19606.86 Da Isoelectric Point: 8.8196
>NTDB_id=148477 AYR69_RS15320 WP_000477151.1 3230009..3230524(+) (fimT) [Acinetobacter baumannii strain XH857]
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
Nucleotide
Download Length: 516 bp
>NTDB_id=148477 AYR69_RS15320 WP_000477151.1 3230009..3230524(+) (fimT) [Acinetobacter baumannii strain XH857]
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGCATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAGCATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAC
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGCCATGTGCGCTTAGAAGAGCTTAAAAATTGTTAG
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGCATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAGCATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAC
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGCCATGTGCGCTTAGAAGAGCTTAAAAATTGTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Acinetobacter baylyi ADP1 |
43.976 |
97.076 |
0.427 |