Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | AYM36_RS12180 | Genome accession | NZ_CP014441 |
| Coordinates | 2294619..2295089 (+) | Length | 156 a.a. |
| NCBI ID | WP_000164421.1 | Uniprot ID | P65329 |
| Organism | Staphylococcus aureus strain USA300-SUR23 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2289619..2300089
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYM36_RS12160 (AYM36_11825) | coaW | 2289928..2290731 (+) | 804 | WP_000862727.1 | type II pantothenate kinase | - |
| AYM36_RS12165 (AYM36_11830) | - | 2290861..2291532 (-) | 672 | WP_000120549.1 | DUF2750 domain-containing protein | - |
| AYM36_RS12170 (AYM36_11835) | - | 2291931..2293124 (-) | 1194 | WP_000183726.1 | hypothetical protein | - |
| AYM36_RS12175 (AYM36_11840) | - | 2293124..2294308 (-) | 1185 | WP_001291500.1 | M20 family metallopeptidase | - |
| AYM36_RS12180 (AYM36_11845) | luxS | 2294619..2295089 (+) | 471 | WP_000164421.1 | S-ribosylhomocysteine lyase | Regulator |
| AYM36_RS12185 (AYM36_11850) | - | 2295241..2295591 (-) | 351 | WP_001024035.1 | membrane protein | - |
| AYM36_RS12190 (AYM36_11855) | - | 2295605..2296906 (-) | 1302 | WP_001242318.1 | pyrimidine-nucleoside phosphorylase | - |
| AYM36_RS12200 (AYM36_11865) | deoC | 2297185..2297847 (-) | 663 | WP_001083316.1 | deoxyribose-phosphate aldolase | - |
| AYM36_RS12205 (AYM36_11870) | deoD | 2298162..2298872 (+) | 711 | WP_000160304.1 | purine-nucleoside phosphorylase | - |
| AYM36_RS12210 (AYM36_11875) | - | 2298993..2299436 (-) | 444 | WP_000070866.1 | Dps family protein | - |
| AYM36_RS12215 (AYM36_11880) | - | 2299636..2300049 (-) | 414 | WP_001123303.1 | thiol-disulfide oxidoreductase DCC family protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17513.76 Da Isoelectric Point: 5.4567
>NTDB_id=147609 AYM36_RS12180 WP_000164421.1 2294619..2295089(+) (luxS) [Staphylococcus aureus strain USA300-SUR23]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK
Nucleotide
Download Length: 471 bp
>NTDB_id=147609 AYM36_RS12180 WP_000164421.1 2294619..2295089(+) (luxS) [Staphylococcus aureus strain USA300-SUR23]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAGGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCCG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAGGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCCG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
44.681 |
90.385 |
0.404 |