Detailed information NTG0147436

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ABH13_RS05855
• Genome accession: NZ_CP011686
• Coordinates: 1142767..1143720 (+)
• Length: 317 a.a.
• NCBI ID: WP_007409125.1
• Uniprot ID: A7Z3B8
• Organism: Bacillus velezensis strain G341
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1137767..1148720

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABH13_RS05825 (ABH13_1128)	argF	1139585..1140556 (+)	972	WP_007409130.1	ornithine carbamoyltransferase	-
ABH13_RS05830 (ABH13_1129)	-	1140632..1140811 (+)	180	WP_003155070.1	YjzC family protein	-
ABH13_RS05835 (ABH13_1130)	-	1140848..1141033 (-)	186	WP_007409129.1	YjzD family protein	-
ABH13_RS05845 (ABH13_1132)	-	1141294..1142028 (+)	735	WP_007409127.1	hypothetical protein	-
ABH13_RS05850 (ABH13_1133)	-	1142111..1142677 (+)	567	WP_007409126.1	hypothetical protein	-
ABH13_RS05855 (ABH13_1134)	med	1142767..1143720 (+)	954	WP_007409125.1	BMP family ABC transporter substrate-binding protein	Regulator
ABH13_RS05860 (ABH13_1135)	comZ	1143733..1143924 (+)	192	WP_007409124.1	ComZ family protein	Regulator
ABH13_RS05865 (ABH13_1136)	-	1143953..1144171 (-)	219	WP_007409123.1	hypothetical protein	-
ABH13_RS05870 (ABH13_1137)	-	1144338..1145276 (+)	939	WP_007409122.1	beta-ketoacyl-ACP synthase III	-
ABH13_RS05875 (ABH13_1138)	fabF	1145299..1146537 (+)	1239	WP_020955629.1	beta-ketoacyl-ACP synthase II	-
ABH13_RS05880 (ABH13_1139)	-	1146620..1147405 (+)	786	WP_020955630.1	DUF2268 domain-containing protein	-
ABH13_RS05885 (ABH13_1140)	-	1147579..1148565 (+)	987	WP_007409119.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35342.99 Da
• Isoelectric Point: 4.6686

>NTDB_id=147436 ABH13_RS05855 WP_007409125.1 1142767..1143720(+) (med) [Bacillus velezensis strain G341]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=147436 ABH13_RS05855 WP_007409125.1 1142767..1143720(+) (med) [Bacillus velezensis strain G341]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACTATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A7Z3B8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.549	100	0.785