Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   AB190_RS08750 Genome accession   NZ_CP011591
Coordinates   1491791..1492417 (-) Length   208 a.a.
NCBI ID   WP_023311030.1    Uniprot ID   A0A1Z3N2L7
Organism   Enterobacter asburiae strain CAV1043     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 1486791..1497417
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB190_RS08735 (AB190_08730) helD 1487028..1489082 (-) 2055 WP_047742292.1 DNA helicase IV -
  AB190_RS08740 (AB190_08735) - 1489206..1489652 (+) 447 WP_023311032.1 YccF domain-containing protein -
  AB190_RS08745 (AB190_08740) yccS 1489672..1491834 (+) 2163 WP_045354509.1 YccS family putative transporter -
  AB190_RS08750 (AB190_08745) sxy/tfoX 1491791..1492417 (-) 627 WP_023311030.1 TfoX/Sxy family DNA transformation protein Regulator
  AB190_RS08755 (AB190_08750) sulA 1492635..1493144 (+) 510 WP_047742294.1 SOS-induced cell division inhibitor SulA -
  AB190_RS08760 (AB190_08755) ompA 1493499..1494554 (+) 1056 WP_023311028.1 porin OmpA -
  AB190_RS08765 (AB190_08760) matP 1494618..1495070 (-) 453 WP_008499929.1 macrodomain Ter protein MatP -
  AB190_RS08770 (AB190_08765) - 1495257..1497017 (+) 1761 WP_023311027.1 AAA family ATPase -

Sequence


Protein


Download         Length: 208 a.a.        Molecular weight: 23906.46 Da        Isoelectric Point: 9.4588

>NTDB_id=147088 AB190_RS08750 WP_023311030.1 1491791..1492417(-) (sxy/tfoX) [Enterobacter asburiae strain CAV1043]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARASWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=147088 AB190_RS08750 WP_023311030.1 1491791..1492417(-) (sxy/tfoX) [Enterobacter asburiae strain CAV1043]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCCCCGTTGGGCGAGATTCATCATCGCGCGCT
GTTTGGAGGCTATACCCTGGCGGTGGATGATGCGGTTTTTGCCATGGTGTCAGACGGAGAGCTTTATCTTCGCGCCTGTG
AGGAGAGTGCGAAATACTGTGTAAAAAATGCCTCCTCTTTTTTAACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGATGGATTATGGCAGGACAGGGAGCGGTTGCTTCAGCTCTCCTCGTTTGCGCTCAGTGCGGCAAG
AAAAGAACGCTATCAGCGCCATCAACGAAACCGACTTAAGGATCTGCCAAACCTGACCTTTCAACTTGAAGTCTTGCTCT
TTGAAGCTGGCATTACCAATGAGGAAACGCTGCGGGCGCTGGGTGCAAGGGCGAGCTGGCTAAAGATGCGGGCAAAAAAC
AAAGCGCTCAGTATTAAAGTTCTCTTCGCGCTGGAAGGGGCTATCGAGGGGCTGCATGAGGCGGCACTCCCGGCAGGCAT
TCGCCGGGAGCTAACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1Z3N2L7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567


Multiple sequence alignment