Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ABY61_RS07255 Genome accession   NZ_CP011574
Coordinates   1514601..1515224 (-) Length   207 a.a.
NCBI ID   WP_026612357.1    Uniprot ID   A0AAW9LN46
Organism   Klebsiella aerogenes strain CAV1320     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1509601..1520224
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABY61_RS07240 (ABY61_07250) helD 1509836..1511890 (-) 2055 WP_047739914.1 DNA helicase IV -
  ABY61_RS07245 (ABY61_07255) - 1512014..1512460 (+) 447 WP_020079238.1 YccF domain-containing protein -
  ABY61_RS07250 (ABY61_07260) yccS 1512478..1514613 (+) 2136 WP_020079239.1 YccS family putative transporter -
  ABY61_RS07255 (ABY61_07265) sxy/tfoX 1514601..1515224 (-) 624 WP_026612357.1 TfoX/Sxy family DNA transformation protein Regulator
  ABY61_RS07260 (ABY61_07270) sulA 1515674..1516183 (+) 510 WP_020079240.1 SOS-induced cell division inhibitor SulA -
  ABY61_RS07265 (ABY61_07275) ompA 1516536..1517588 (+) 1053 WP_080473199.1 porin OmpA -
  ABY61_RS07270 (ABY61_07280) matP 1517680..1518132 (-) 453 WP_015367432.1 macrodomain Ter protein MatP -
  ABY61_RS07275 (ABY61_07285) - 1518318..1520075 (+) 1758 WP_047739915.1 Lon protease family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23612.33 Da        Isoelectric Point: 10.0181

>NTDB_id=146996 ABY61_RS07255 WP_026612357.1 1514601..1515224(-) (sxy/tfoX) [Klebsiella aerogenes strain CAV1320]
MKKISKLRFLQFQECLSPLGKISSRPLFGGYSLAIENTVFAMVAEGEIYLRVCEQSASYRVEHHSPMLMMRKNGRPVALK
YYRIDEALWQDSKMLFHLSQLSLHSARSEKQHQRDSGRLKNLPNISFHMELMLIHAGITDVKMLRTLGAEKSWLKLREHN
KGISINVLESLAGAIAGIHSAALPAQRRQELREWANTQGYSVEDYSG

Nucleotide


Download         Length: 624 bp        

>NTDB_id=146996 ABY61_RS07255 WP_026612357.1 1514601..1515224(-) (sxy/tfoX) [Klebsiella aerogenes strain CAV1320]
ATGAAGAAAATTTCAAAATTACGGTTCCTCCAGTTTCAGGAGTGCCTTTCCCCCTTAGGTAAAATCAGTAGCCGGCCTTT
ATTCGGCGGGTATAGTCTGGCGATTGAAAATACCGTATTCGCCATGGTGGCTGAGGGCGAAATCTATCTTAGGGTTTGCG
AACAAAGCGCCTCTTATCGGGTTGAACATCACAGCCCGATGCTGATGATGCGCAAGAATGGCCGGCCAGTGGCCTTAAAG
TATTACCGGATAGATGAAGCACTATGGCAGGACAGTAAAATGCTGTTTCACCTATCGCAGCTGTCATTGCATTCGGCGCG
AAGCGAAAAGCAGCATCAGCGTGATTCCGGCAGACTAAAGAATTTGCCTAATATCAGCTTCCATATGGAGTTGATGTTGA
TCCATGCCGGAATAACCGATGTGAAAATGCTGCGTACACTCGGGGCGGAAAAGAGCTGGTTAAAATTGAGAGAGCATAAT
AAAGGAATATCAATCAATGTCCTTGAGTCCCTGGCGGGCGCGATTGCCGGCATTCATTCCGCCGCGCTCCCGGCGCAGCG
GCGCCAGGAGCTACGGGAGTGGGCTAATACACAAGGATACAGCGTGGAGGATTATTCCGGTTGA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-105)

TfoX C-terminal domain (TfoX_C)

(117-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.777

95.169

0.493

Multiple sequence alignment