Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ABA10_RS07705 Genome accession   NZ_CP011534
Coordinates   1471966..1472430 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain UD1022     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1466966..1477430
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABA10_RS07685 (ABA10_07685) kinA 1467433..1469253 (+) 1821 WP_047182543.1 sporulation histidine kinase KinA -
  ABA10_RS07690 (ABA10_07690) dapX 1469263..1470444 (-) 1182 WP_014476653.1 aminotransferase A -
  ABA10_RS21000 (ABA10_07695) - 1470646..1470807 (-) 162 WP_003245246.1 hypothetical protein -
  ABA10_RS07700 (ABA10_07700) cheV 1471011..1471922 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  ABA10_RS07705 (ABA10_07705) kre 1471966..1472430 (-) 465 WP_003232406.1 YkyB family protein Regulator
  ABA10_RS07710 (ABA10_07710) ykuC 1472556..1473848 (-) 1293 WP_047182544.1 MFS transporter -
  ABA10_RS07715 (ABA10_07715) ltdD 1473924..1474418 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  ABA10_RS07720 (ABA10_07720) ppeE 1474475..1475335 (-) 861 WP_047182545.1 metallophosphoesterase -
  ABA10_RS07725 (ABA10_07725) fadH 1475478..1476242 (+) 765 WP_015383534.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=146733 ABA10_RS07705 WP_003232406.1 1471966..1472430(-) (kre) [Bacillus subtilis strain UD1022]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=146733 ABA10_RS07705 WP_003232406.1 1471966..1472430(-) (kre) [Bacillus subtilis strain UD1022]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment