Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   ABA10_RS06280 Genome accession   NZ_CP011534
Coordinates   1216988..1217644 (+) Length   218 a.a.
NCBI ID   WP_015383354.1    Uniprot ID   -
Organism   Bacillus subtilis strain UD1022     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1211988..1222644
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABA10_RS06255 (ABA10_06255) oppF 1212453..1213370 (+) 918 WP_047182432.1 oligopeptide ABC transporter ATP-binding protein OppF -
  ABA10_RS06260 (ABA10_06260) yjbB 1213474..1214691 (+) 1218 WP_080344185.1 MFS transporter -
  ABA10_RS06265 (ABA10_06265) yjbC 1214855..1215433 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  ABA10_RS06270 (ABA10_06270) spx 1215614..1216009 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  ABA10_RS06275 (ABA10_06275) yjbE 1216055..1216711 (-) 657 WP_003232944.1 TerC family protein -
  ABA10_RS21605 - 1216881..1217021 (+) 141 WP_119122854.1 hypothetical protein -
  ABA10_RS06280 (ABA10_06280) mecA 1216988..1217644 (+) 657 WP_015383354.1 adaptor protein MecA Regulator
  ABA10_RS21610 - 1217639..1217760 (-) 122 Protein_1171 hypothetical protein -
  ABA10_RS06285 (ABA10_06285) coiA 1217834..1218955 (+) 1122 WP_250540423.1 competence protein CoiA Machinery gene
  ABA10_RS06290 (ABA10_06290) pepF 1219185..1221014 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  ABA10_RS20935 (ABA10_06295) - 1221052..1221219 (-) 168 WP_003244944.1 hypothetical protein -
  ABA10_RS06305 (ABA10_06305) spxH 1221534..1222433 (-) 900 WP_003245184.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25749.62 Da        Isoelectric Point: 4.0841

>NTDB_id=146728 ABA10_RS06280 WP_015383354.1 1216988..1217644(+) (mecA) [Bacillus subtilis strain UD1022]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSNLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYATESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=146728 ABA10_RS06280 WP_015383354.1 1216988..1217644(+) (mecA) [Bacillus subtilis strain UD1022]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTTTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAATTTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAC
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

99.541

100

0.995

Multiple sequence alignment