Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ABA10_RS04615 Genome accession   NZ_CP011534
Coordinates   910094..910888 (+) Length   264 a.a.
NCBI ID   WP_047182313.1    Uniprot ID   -
Organism   Bacillus subtilis strain UD1022     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 905094..915888
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABA10_RS04585 (ABA10_04585) sxzA 905933..906964 (+) 1032 WP_047182309.1 iron ABC transporter permease -
  ABA10_RS04590 (ABA10_04590) yfhB 907079..907960 (+) 882 WP_047182310.1 PhzF family phenazine biosynthesis isomerase -
  ABA10_RS04595 (ABA10_04595) yfhC 908048..908632 (+) 585 WP_047182311.1 nitroreductase -
  ABA10_RS04600 (ABA10_04600) yfhD 908671..908862 (-) 192 WP_014479215.1 YfhD family protein -
  ABA10_RS20870 (ABA10_04605) yfhE 908929..909039 (-) 111 WP_003223230.1 YfhE family protein -
  ABA10_RS04610 (ABA10_04610) yfhF 909094..910005 (-) 912 WP_047182312.1 TIGR01777 family oxidoreductase -
  ABA10_RS04615 (ABA10_04615) recX 910094..910888 (+) 795 WP_047182313.1 recombination regulator RecX Regulator
  ABA10_RS04620 (ABA10_04620) yfhH 910890..911204 (+) 315 WP_047182314.1 YfhH family protein -
  ABA10_RS04630 (ABA10_04630) yfhI 911348..912541 (+) 1194 WP_003243500.1 MFS transporter -
  ABA10_RS04635 (ABA10_04635) sspK 912573..912725 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  ABA10_RS04640 (ABA10_04640) yfhJ 912850..913119 (+) 270 WP_003243789.1 YfhJ family protein -
  ABA10_RS04645 (ABA10_04645) yfhK 913264..913782 (+) 519 WP_047182316.1 SH3 domain-containing protein -
  ABA10_RS04650 (ABA10_04650) spdL 913867..914199 (+) 333 WP_041517766.1 SdpC immunity protein SpdL -
  ABA10_RS04655 (ABA10_04655) ephM 914186..915046 (+) 861 WP_047182317.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31043.26 Da        Isoelectric Point: 6.6686

>NTDB_id=146716 ABA10_RS04615 WP_047182313.1 910094..910888(+) (recX) [Bacillus subtilis strain UD1022]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRTKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=146716 ABA10_RS04615 WP_047182313.1 910094..910888(+) (recX) [Bacillus subtilis strain UD1022]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAACGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGTAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment