Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | ABA10_RS00240 | Genome accession | NZ_CP011534 |
| Coordinates | 44700..44990 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain UD1022 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 39700..49990
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABA10_RS00200 (ABA10_00200) | darA | 39723..40052 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| ABA10_RS00205 (ABA10_00205) | yaaR | 40065..40505 (+) | 441 | WP_015382556.1 | YaaR family protein | - |
| ABA10_RS00210 (ABA10_00210) | holB | 40517..41506 (+) | 990 | WP_015482689.1 | DNA polymerase III subunit delta' | - |
| ABA10_RS00215 (ABA10_00215) | ricT | 41509..42336 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| ABA10_RS00220 (ABA10_00220) | yabA | 42351..42710 (+) | 360 | WP_047181966.1 | replication initiation-control protein YabA | - |
| ABA10_RS00225 (ABA10_00225) | trmNF | 42769..43512 (+) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| ABA10_RS00230 (ABA10_00230) | yazA | 43499..43798 (+) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| ABA10_RS00235 (ABA10_00235) | rsmI | 43773..44651 (+) | 879 | WP_041517603.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| ABA10_RS00240 (ABA10_00240) | abrB | 44700..44990 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| ABA10_RS00245 (ABA10_00245) | metG | 45485..47479 (+) | 1995 | WP_015382561.1 | methionine--tRNA ligase | - |
| ABA10_RS00250 (ABA10_00250) | dayD | 47559..48326 (+) | 768 | WP_014475570.1 | TatD family hydrolase | - |
| ABA10_RS00255 (ABA10_00255) | yabE | 48482..49795 (+) | 1314 | WP_047181967.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=146706 ABA10_RS00240 WP_003226760.1 44700..44990(-) (abrB) [Bacillus subtilis strain UD1022]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=146706 ABA10_RS00240 WP_003226760.1 44700..44990(-) (abrB) [Bacillus subtilis strain UD1022]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |