Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | AYM25_RS11880 | Genome accession | NZ_CP014407 |
| Coordinates | 2255495..2255965 (+) | Length | 156 a.a. |
| NCBI ID | WP_000164421.1 | Uniprot ID | P65329 |
| Organism | Staphylococcus aureus strain USA300-SUR12 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2250495..2260965
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYM25_RS11860 (AYM25_11525) | coaW | 2250804..2251607 (+) | 804 | WP_000862727.1 | type II pantothenate kinase | - |
| AYM25_RS11865 (AYM25_11530) | - | 2251737..2252408 (-) | 672 | WP_000120549.1 | DUF2750 domain-containing protein | - |
| AYM25_RS11870 (AYM25_11535) | - | 2252807..2254000 (-) | 1194 | WP_000183726.1 | hypothetical protein | - |
| AYM25_RS11875 (AYM25_11540) | - | 2254000..2255184 (-) | 1185 | WP_001291500.1 | M20 family metallopeptidase | - |
| AYM25_RS11880 (AYM25_11545) | luxS | 2255495..2255965 (+) | 471 | WP_000164421.1 | S-ribosylhomocysteine lyase | Regulator |
| AYM25_RS11885 (AYM25_11550) | - | 2256117..2256467 (-) | 351 | WP_001024035.1 | membrane protein | - |
| AYM25_RS11890 (AYM25_11555) | - | 2256481..2257782 (-) | 1302 | WP_001242318.1 | pyrimidine-nucleoside phosphorylase | - |
| AYM25_RS11900 (AYM25_11565) | deoC | 2258061..2258723 (-) | 663 | WP_001083316.1 | deoxyribose-phosphate aldolase | - |
| AYM25_RS11905 (AYM25_11570) | deoD | 2259038..2259748 (+) | 711 | WP_000160304.1 | purine-nucleoside phosphorylase | - |
| AYM25_RS11910 (AYM25_11575) | - | 2259869..2260312 (-) | 444 | WP_000070866.1 | Dps family protein | - |
| AYM25_RS11915 (AYM25_11580) | - | 2260512..2260925 (-) | 414 | WP_001123303.1 | thiol-disulfide oxidoreductase DCC family protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17513.76 Da Isoelectric Point: 5.4567
>NTDB_id=146643 AYM25_RS11880 WP_000164421.1 2255495..2255965(+) (luxS) [Staphylococcus aureus strain USA300-SUR12]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK
Nucleotide
Download Length: 471 bp
>NTDB_id=146643 AYM25_RS11880 WP_000164421.1 2255495..2255965(+) (luxS) [Staphylococcus aureus strain USA300-SUR12]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAGGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCCG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAGGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCCG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
44.681 |
90.385 |
0.404 |