Detailed information NTG0146140

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: AA650_RS12970
• Genome accession: NZ_CP011456
• Coordinates: 3013398..3014504 (+)
• Length: 368 a.a.
• NCBI ID: WP_053539331.1
• Uniprot ID: -
• Organism: Anabaena sp. WA102 isolate
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3008398..3019504

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AA650_RS12945 (AA650_12995)	-	3008418..3008933 (-)	516	WP_027403906.1	TIGR02652 family protein	-
AA650_RS12950 (AA650_13000)	-	3009173..3009676 (+)	504	WP_053539328.1	gamma carbonic anhydrase family protein	-
AA650_RS12955 (AA650_13005)	-	3009907..3010032 (+)	126	WP_053539329.1	photosystem II protein Y	-
AA650_RS12960 (AA650_13010)	-	3010104..3011405 (+)	1302	WP_053539330.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-
AA650_RS12965 (AA650_13015)	-	3011631..3012929 (-)	1299	WP_039201368.1	sugar ABC transporter substrate-binding protein	-
AA650_RS26480	-	3012985..3013206 (-)	222	WP_199924243.1	hypothetical protein	-
AA650_RS12970 (AA650_13020)	pilM	3013398..3014504 (+)	1107	WP_053539331.1	type IV pilus biogenesis protein PilM	Machinery gene
AA650_RS12975 (AA650_13025)	-	3014509..3015309 (+)	801	WP_039201367.1	PilN domain-containing protein	-
AA650_RS12980 (AA650_13030)	-	3015306..3016067 (+)	762	WP_053539332.1	pilus assembly protein PilO	-
AA650_RS12985 (AA650_13045)	-	3016528..3018786 (+)	2259	WP_053539333.1	type IV pilus secretin family protein	-
AA650_RS12990 (AA650_13050)	pyrR	3018956..3019492 (-)	537	WP_039200174.1	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 40548.54 Da
• Isoelectric Point: 4.4040

>NTDB_id=146140 AA650_RS12970 WP_053539331.1 3013398..3014504(+) (pilM) [Anabaena sp. WA102 isolate]
MVKAFTSFFGKSNRGIGIELAPERVNVVQLRKQRQNLKIESLTTVPVPEGIFTDGQITDSPGMSEIIQQAIAQSKIKATR
VATCIPGRDAIVRLIPVPSELDDQELREMVLNHEACLYLPYDRQEADVDYQKLGYFIDEDGIEKVQVLLVATRKNVTQTY
LNTFEQAGLTVDILEINSFALIRTIRDQLRLFGPEEAAVLVDIEFDSTEIAIIINGVPQFSRTVPIGTYQLQAALSRAVN
LPTSRDMDILESMTIPTTSADSVNTGVTGSNPGMVSMLRILGELADELRRSIDFYLNQSENLEVAQILLAGPGGGLPQID
EFFTQRLSLPTTQIDPITSLSLEVDAEKYPLIKRPGLGIILGLGMRGV

Nucleotide

• Length: 1107 bp

>NTDB_id=146140 AA650_RS12970 WP_053539331.1 3013398..3014504(+) (pilM) [Anabaena sp. WA102 isolate]
GTGGTTAAAGCCTTTACTAGTTTCTTTGGTAAATCCAATAGAGGTATTGGGATTGAACTAGCACCGGAACGGGTGAACGT
AGTCCAACTACGCAAACAACGCCAAAACTTAAAAATTGAATCTTTGACAACAGTACCAGTGCCAGAGGGTATATTTACTG
ATGGTCAAATTACTGATTCTCCGGGAATGTCCGAAATTATTCAGCAAGCGATCGCCCAAAGCAAAATCAAAGCTACACGG
GTGGCTACTTGTATTCCAGGAAGAGATGCGATCGTTCGCTTAATTCCCGTCCCCTCGGAATTAGATGACCAAGAATTGCG
AGAAATGGTACTTAACCATGAAGCCTGCTTATATTTGCCCTATGACCGCCAAGAAGCTGATGTTGATTATCAAAAACTTG
GGTACTTTATAGACGAAGACGGCATCGAGAAAGTACAAGTATTATTAGTGGCGACTCGTAAAAATGTCACTCAAACCTAT
TTGAATACCTTTGAACAGGCAGGATTAACCGTTGATATCTTAGAAATTAACAGCTTTGCCCTCATTCGCACCATCCGTGA
TCAACTGCGGCTATTTGGTCCAGAAGAAGCAGCCGTATTAGTTGATATTGAATTTGACAGTACAGAAATTGCCATCATTA
TCAATGGTGTGCCACAATTTTCTCGAACAGTGCCAATAGGAACTTATCAACTACAAGCAGCACTGTCAAGAGCCGTGAAC
CTACCCACATCACGGGATATGGATATATTAGAGAGCATGACTATTCCCACAACCTCAGCAGATTCAGTCAATACTGGGGT
AACAGGTAGTAATCCTGGAATGGTTTCTATGTTGAGAATTTTGGGAGAATTAGCCGATGAACTGCGCCGTTCCATTGATT
TTTACCTCAATCAAAGTGAAAATCTAGAAGTCGCACAGATTCTTTTAGCAGGTCCTGGGGGAGGATTACCACAAATTGAC
GAGTTTTTTACTCAAAGATTGAGTTTACCAACTACCCAAATAGATCCAATTACTTCTTTGTCCTTGGAGGTAGATGCTGA
AAAATATCCTTTAATTAAACGTCCTGGGTTGGGTATTATCCTGGGTTTAGGAATGCGAGGGGTGTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (17-241)

• Type IV pilus assembly protein PilM; (PilM_2) (283-367)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Synechocystis sp. PCC 6803	63.661	99.457	0.633