Detailed information NTG0145869

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: AA105_RS00820
• Genome accession: NZ_CP011419
• Coordinates: 125623..126057 (+)
• Length: 144 a.a.
• NCBI ID: WP_009909097.1
• Uniprot ID: -
• Organism: Streptococcus suis strain NSUI002
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 120623..131057

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AA105_RS00785 (AA105_00785)	-	121365..121730 (+)	366	WP_002936568.1	DUF1033 family protein	-
AA105_RS00790 (AA105_00790)	-	121765..122715 (-)	951	WP_002936565.1	S66 peptidase family protein	-
AA105_RS00795 (AA105_00795)	comYA	122801..123751 (+)	951	WP_002936562.1	competence type IV pilus ATPase ComGA	Machinery gene
AA105_RS00800 (AA105_00800)	comYB	123663..124700 (+)	1038	WP_255195823.1	competence type IV pilus assembly protein ComGB	Machinery gene
AA105_RS00805 (AA105_00805)	comYC	124702..124983 (+)	282	WP_009909092.1	competence type IV pilus major pilin ComGC	Machinery gene
AA105_RS00810 (AA105_00810)	comGD	124964..125371 (+)	408	WP_009909093.1	competence type IV pilus minor pilin ComGD	-
AA105_RS00815 (AA105_00815)	comYE	125343..125636 (+)	294	WP_024390433.1	competence type IV pilus minor pilin ComGE	Machinery gene
AA105_RS00820 (AA105_00820)	comGF/cglF	125623..126057 (+)	435	WP_009909097.1	competence type IV pilus minor pilin ComGF	Machinery gene
AA105_RS00825 (AA105_00825)	comGG	126035..126445 (+)	411	WP_009909099.1	competence type IV pilus minor pilin ComGG	-
AA105_RS00830 (AA105_00830)	comYH	126502..127455 (+)	954	WP_024409299.1	class I SAM-dependent methyltransferase	Machinery gene
AA105_RS00835 (AA105_00835)	-	127505..128692 (+)	1188	WP_053338562.1	acetate kinase	-
AA105_RS00840 (AA105_00840)	-	129007..129603 (+)	597	WP_009909104.1	folate family ECF transporter S component	-
AA105_RS00845 (AA105_00845)	-	129614..130870 (+)	1257	WP_013730079.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16449.77 Da
• Isoelectric Point: 5.9234

>NTDB_id=145869 AA105_RS00820 WP_009909097.1 125623..126057(+) (comGF/cglF) [Streptococcus suis strain NSUI002]
MLKSKIPAFTLLECLVALVILSGSLLVFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQAELVKVENGKVYVNKGE
QALAFGKSWSDDFRKTNDRGQGYQPMLYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=145869 AA105_RS00820 WP_009909097.1 125623..126057(+) (comGF/cglF) [Streptococcus suis strain NSUI002]
TTGTTAAAAAGTAAAATTCCTGCTTTTACTCTCTTGGAATGCTTGGTAGCCTTAGTCATCCTTTCAGGTAGTCTTCTGGT
CTTTGAAGGCTTGTCAAAACTGCTGGTCCAAGAAGCGCATTATCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGCCAATTGCGGTCGGAGTGGGACCAGGCTGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCAACAAAGGTGAA
CAGGCTTTGGCCTTTGGCAAGTCATGGTCGGATGATTTTCGGAAAACAAATGATAGAGGCCAGGGTTACCAACCCATGCT
CTATCAGGTGGATAGCGCAGCCATTTCCCAAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GGACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	53.191	97.917	0.521
comGF/cglF	Streptococcus pneumoniae D39	53.191	97.917	0.521
comGF/cglF	Streptococcus pneumoniae R6	53.191	97.917	0.521
comGF/cglF	Streptococcus pneumoniae TIGR4	53.191	97.917	0.521
comYF	Streptococcus mutans UA140	50	100	0.5
comGF/cglF	Streptococcus mitis NCTC 12261	53.731	93.056	0.5
comYF	Streptococcus mutans UA159	49.306	100	0.493
comGF/cglF	Streptococcus mitis SK321	50.746	93.056	0.472
comGF	Lactococcus lactis subsp. cremoris KW2	46.809	97.917	0.458