Detailed information NTG0145626

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: FORC14_RS01815
• Genome accession: NZ_CP011406
• Coordinates: 383643..384650 (-)
• Length: 335 a.a.
• NCBI ID: WP_005481416.1
• Uniprot ID: A0A072GUT1
• Organism: Vibrio parahaemolyticus strain FORC_014
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 378643..389650

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC14_RS01785 (FORC14_0329)	zapB	378808..379050 (+)	243	WP_005481417.1	cell division protein ZapB	-
FORC14_RS01790 (FORC14_0330)	rraA	379155..379667 (-)	513	WP_005457192.1	ribonuclease E activity regulator RraA	-
FORC14_RS01795 (FORC14_0331)	-	379744..380661 (-)	918	WP_005457195.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
FORC14_RS01800 (FORC14_0332)	hslU	380846..382177 (-)	1332	WP_005489452.1	HslU--HslV peptidase ATPase subunit	-
FORC14_RS01805 (FORC14_0333)	hslV	382201..382752 (-)	552	WP_005455873.1	ATP-dependent protease subunit HslV	-
FORC14_RS01810 (FORC14_0334)	ftsN	382922..383467 (-)	546	WP_005481405.1	cell division protein FtsN	-
FORC14_RS01815 (FORC14_0335)	cytR	383643..384650 (-)	1008	WP_005481416.1	DNA-binding transcriptional regulator CytR	Regulator
FORC14_RS01820 (FORC14_0336)	priA	384983..387187 (-)	2205	WP_063517134.1	primosomal protein N'	-
FORC14_RS01825 (FORC14_0337)	rpmE	387482..387703 (+)	222	WP_005457203.1	50S ribosomal protein L31	-
FORC14_RS01830 (FORC14_0338)	rpsJ	388161..388472 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
FORC14_RS01835 (FORC14_0339)	rplC	388487..389116 (+)	630	WP_005456132.1	50S ribosomal protein L3	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36835.35 Da
• Isoelectric Point: 6.4938

>NTDB_id=145626 FORC14_RS01815 WP_005481416.1 383643..384650(-) (cytR) [Vibrio parahaemolyticus strain FORC_014]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGISKDPQYSVITEFSFDGGAKAVRKLLELPEPPTA
IFCHCDTMAIGAIQEAKRLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPQRA

Nucleotide

• Length: 1008 bp

>NTDB_id=145626 FORC14_RS01815 WP_005481416.1 383643..384650(-) (cytR) [Vibrio parahaemolyticus strain FORC_014]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTCGACAGCTACGGTATCTCGAGCATTAATGAATCCAGAAAA
AGTCTCTTCTTCAACAAGAAAAAGAGTCGAAGATGCCGTCCTTGAAGCGGGCTATTCTCCAAATTCATTAGCGCGTAATC
TACGTAGAAACGAATCAAAAACGATTGTTACCATCGTTCCTGACATCTGTGATCCTTACTTTTCTGAAATCATTCGTGGT
ATCGAAGACGCCGCTATGGAACATGGCTACCTCGTACTGCTCGGTGACAGCGGCCAGCAGAAAAAGCGTGAAAGCTCATT
TGTGAATCTAGTGTTCACCAAACAAGCCGATGGCATGTTACTGCTTGGCACCGACCTGCCATTTGATGTCAGCAAGCCAG
AACAGAAAAACCTGCCACCAATGGTCATGGCTTGTGAGTTTGCGCCAGAGCTAGAATTACCAACCGTGCACATTGACAAC
CTAACGTCTGCTTTTGAAGCGGTCAATTACCTAACTCAACTTGGCCATAAACGCATAGCACAAATTTCAGGGCCAGACAC
AGCGGTATTGTGCCAGTTCCGCCAGCAAGGTTATCAACAAGCCTTGCGTCGCGCGGGGATCAGTAAAGACCCACAATACA
GCGTTATCACTGAGTTTTCTTTTGACGGCGGCGCGAAAGCTGTACGTAAGTTGCTAGAACTTCCAGAGCCACCAACTGCG
ATTTTCTGCCACTGTGACACCATGGCAATCGGCGCAATCCAAGAAGCGAAACGACTCGGTCTGCGCGTTCCGCAAGATCT
GTCAGTGGTTGGTTTCGATGATATCAACTTTGCTCAATACTGCGATCCACCGTTAACAACCATTTCTCAACCTCGTTATG
AAATTGGCCGCCAAGCGATGCTTATGATGCTTGAACTCCTGAAAGGCCATGACGTTCATTCAGGTTCACGCTTACTAGAA
ACTAAGCTTGTTGTCCGTGGTAGCGCAGCGCCACCGCAACGCGCCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A072GUT1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	100	100	1
cytR	Vibrio cholerae C6706	90.719	99.701	0.904