Detailed information    

insolico Bioinformatically predicted

Overview

Name   rec2   Type   Machinery gene
Locus tag   ASU2_RS03190 Genome accession   NC_018690
Coordinates   675504..677798 (+) Length   764 a.a.
NCBI ID   WP_014991376.1    Uniprot ID   -
Organism   Actinobacillus suis H91-0380     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 670504..682798
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ASU2_RS03165 (ASU2_03120) - 670920..671285 (-) 366 WP_014991371.1 hypothetical protein -
  ASU2_RS03170 (ASU2_03125) - 671411..671710 (-) 300 WP_014991372.1 DUF4298 domain-containing protein -
  ASU2_RS03175 (ASU2_03130) ushA 671793..673436 (-) 1644 WP_014991373.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA -
  ASU2_RS03180 (ASU2_03135) - 673514..673876 (-) 363 WP_014991374.1 diacylglycerol kinase -
  ASU2_RS03185 (ASU2_03140) sstT 674153..675364 (+) 1212 WP_014991375.1 serine/threonine transporter SstT -
  ASU2_RS03190 (ASU2_03145) rec2 675504..677798 (+) 2295 WP_014991376.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ASU2_RS03195 (ASU2_03150) queA 677812..678897 (-) 1086 WP_014991377.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  ASU2_RS03200 (ASU2_03155) - 678943..679872 (-) 930 WP_014991378.1 gluconeogenesis factor YvcK family protein -
  ASU2_RS03205 (ASU2_03160) - 679967..681031 (-) 1065 WP_014991379.1 AI-2E family transporter -
  ASU2_RS03210 (ASU2_03165) - 681089..681844 (-) 756 WP_005622811.1 class I SAM-dependent methyltransferase -
  ASU2_RS11865 (ASU2_03170) - 682022..682258 (+) 237 Protein_632 alternative ribosome-rescue factor A -

Sequence

Protein


Download         Length: 764 a.a.        Molecular weight: 87858.88 Da        Isoelectric Point: 9.9059

>NTDB_id=1456 ASU2_RS03190 WP_014991376.1 675504..677798(+) (rec2) [Actinobacillus suis H91-0380]
MNFDRFVLVLSLFFLPLLFLPQEWLTYGCYVAVLIIIIGIFRKQALTILLGALILVSYWQIINISESADKYAIPSQQLYQ
FQVQKIIKQDEFQTALARLENGDLIYLNWQSDEPLELEQHYQANLKIRPIAARLNIGNFDRQRWFFAHHLKGSATVKKAN
KLVSQYVRSLRVQWLEYVRKQLEPFPSRGLLLALAFGERAWLANSDWQLFQQTSTAHLIAISGLHIGLAMGIGFWLAKCI
QWLFLRIGVLSAGSISIFFPRCVGLVFAIFYSYLSGFAIPTLRALLAISLVLLCQWLRRYYTAWQLWWRIVALLLVLDPL
TILSDSFWLSVLAVLSLIIWYQYFPLTKLFPFCKKWQKFNRLWLSLVHLQLGIFLVFSPVQFFFFEGISPWAFITNFIIV
PLYSLLLVPLVIFSLLTNNILNSWAWADWLAQGSLKILSLLSADWITLSQSEQHYLFALNALCLLLLYLLQEKLFIRYWK
LLGLFVLSSSFAIFFIKFPVSPEWVTFDVGQGLAQALVYQDSGKKRAILYDTGASWKDKSGRIGSMAQLEILPYLKRNGI
QVEAVFLSHDDNDHSGGAEDILAEYPHARLISASTRRYAKHDPEACIAGQTWQFGQFELKAIYPISRVKRAKNEDSCIIL
VKIDRFSLLFTGDTTSAKEGSFAHKIGQVDFLQISHHGSKTSSSYTLLAQTKPQIAIISAGRWNPWKMPHQQVLTRLSQQ
NIKTFSTARVGMVKVSFEKGSWKIETARNNRSPWYRETYGLPNQ

Nucleotide


Download         Length: 2295 bp        

>NTDB_id=1456 ASU2_RS03190 WP_014991376.1 675504..677798(+) (rec2) [Actinobacillus suis H91-0380]
ATGAATTTTGACCGCTTTGTTCTTGTCCTTTCGTTATTTTTTCTTCCATTACTTTTCTTACCCCAAGAATGGCTTACTTA
TGGCTGCTATGTGGCAGTTTTGATAATTATTATAGGAATATTCCGTAAACAAGCATTAACTATTTTATTAGGCGCTTTAA
TACTAGTAAGCTATTGGCAAATTATCAATATATCAGAAAGCGCAGATAAGTATGCAATACCTTCTCAGCAATTGTACCAA
TTTCAAGTTCAGAAAATTATTAAGCAAGATGAGTTTCAAACAGCATTAGCGAGGTTAGAAAATGGCGATCTGATTTATTT
AAACTGGCAGTCGGATGAGCCGTTAGAATTAGAACAACATTATCAAGCGAATCTTAAGATACGACCTATTGCTGCTCGCT
TAAATATTGGAAATTTTGATCGGCAGCGTTGGTTCTTCGCACATCATTTAAAGGGGAGTGCAACAGTCAAAAAAGCGAAT
AAGCTGGTCTCACAATACGTGAGATCTTTGCGTGTTCAATGGCTGGAATATGTCAGAAAACAATTAGAACCATTTCCATC
TAGGGGACTATTACTGGCATTAGCTTTTGGTGAACGTGCTTGGCTAGCCAATTCAGATTGGCAACTATTTCAACAAACTT
CTACCGCACATTTAATTGCTATTTCCGGCTTACATATTGGGCTAGCGATGGGGATTGGATTCTGGTTGGCAAAGTGTATT
CAGTGGCTTTTTCTACGGATAGGAGTCTTATCTGCTGGAAGCATTTCTATCTTTTTCCCGAGATGTGTAGGGCTAGTTTT
TGCTATTTTCTATAGTTATTTATCCGGTTTTGCGATTCCTACTTTACGGGCATTACTTGCGATTTCTCTTGTCTTATTAT
GTCAATGGCTACGCCGCTATTACACTGCTTGGCAATTATGGTGGCGTATTGTTGCATTATTACTTGTGCTTGATCCTCTC
ACAATTCTATCGGATAGTTTTTGGTTATCGGTTTTAGCCGTACTAAGTTTAATCATTTGGTATCAGTATTTTCCGCTCAC
CAAGCTTTTCCCCTTTTGCAAAAAATGGCAGAAATTTAACCGCTTGTGGCTGTCACTAGTACATTTGCAATTAGGGATTT
TTCTCGTATTTTCTCCAGTACAATTTTTCTTTTTTGAGGGGATTTCACCTTGGGCATTTATCACTAATTTCATAATTGTA
CCGTTATACAGTTTGTTGTTAGTTCCGCTAGTTATCTTTTCATTACTAACTAACAATATATTGAATAGCTGGGCGTGGGC
GGATTGGCTAGCACAGGGGAGTTTGAAAATACTTTCTTTGCTTTCCGCCGATTGGATAACGTTAAGCCAAAGCGAGCAAC
ATTATTTGTTCGCTTTGAATGCGTTGTGTCTATTGTTACTGTACCTCTTACAAGAAAAATTATTTATAAGATATTGGAAA
CTGTTGGGATTATTTGTCTTAAGCAGCAGTTTTGCGATTTTCTTCATCAAGTTTCCGGTTTCACCGGAGTGGGTGACATT
TGATGTCGGACAAGGACTTGCACAGGCACTTGTTTATCAAGATAGCGGTAAAAAACGTGCCATTCTTTACGATACAGGTG
CAAGCTGGAAAGATAAATCGGGGCGAATAGGTTCGATGGCCCAATTAGAAATTTTGCCTTATTTGAAGCGTAATGGAATT
CAAGTAGAAGCCGTTTTTTTAAGCCATGACGATAATGATCACTCCGGTGGAGCGGAAGATATTCTTGCTGAATATCCCCA
CGCACGTCTAATTTCGGCAAGTACTCGCCGTTATGCCAAGCATGATCCTGAAGCCTGTATTGCCGGTCAAACGTGGCAAT
TTGGACAATTTGAATTAAAAGCCATTTATCCGATATCAAGAGTAAAACGCGCGAAGAATGAAGATTCTTGCATTATTTTG
GTAAAAATAGACCGCTTCTCCTTGCTGTTTACCGGTGACACTACCTCAGCAAAAGAAGGTTCATTCGCTCATAAAATCGG
GCAAGTTGATTTCTTACAGATTTCTCATCATGGTAGTAAAACGAGTTCCAGCTATACTCTATTAGCTCAGACAAAACCGC
AAATTGCTATTATTTCTGCAGGACGATGGAATCCTTGGAAAATGCCTCATCAACAAGTATTAACACGCTTATCACAACAA
AATATTAAAACCTTTAGCACTGCAAGGGTAGGGATGGTAAAAGTGAGTTTTGAGAAGGGGAGTTGGAAGATAGAGACGGC
GAGAAATAACAGAAGCCCATGGTATCGAGAGACTTATGGGCTTCCAAATCAATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(518-701)

Competence protein (Competence)

(194-470)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rec2 Haemophilus influenzae Rd KW20

41.441

100

0.421

Multiple sequence alignment