Detailed information NTG0145533

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AWN69_RS05980
• Genome accession: NZ_CP014348
• Coordinates: 1212200..1213225 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli str. K-12 substr. MG1655 strain JW5437-1
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1207200..1218225

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AWN69_RS05960 (AWN69_05975)	metJ	1208261..1208578 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AWN69_RS05965 (AWN69_05980)	yiiX	1208762..1209370 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AWN69_RS05970 (AWN69_05985)	rpmE	1209431..1209643 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AWN69_RS05975 (AWN69_05990)	priA	1209846..1212044 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
AWN69_RS05980 (AWN69_05995)	cytR	1212200..1213225 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AWN69_RS05985 (AWN69_06000)	ftsN	1213317..1214276 (+)	960	WP_000068828.1	cell division protein FtsN	-
AWN69_RS05990 (AWN69_06005)	hslV	1214369..1214899 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AWN69_RS05995 (AWN69_06010)	hslU	1214909..1216240 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AWN69_RS06000 (AWN69_06015)	menA	1216307..1217233 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AWN69_RS06005 (AWN69_06020)	rraA	1217326..1217811 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AWN69_RS06010 (AWN69_06025)	zapB	1217896..1218141 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=145533 AWN69_RS05980 WP_000644904.1 1212200..1213225(+) (cytR) [Escherichia coli str. K-12 substr. MG1655 strain JW5437-1]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=145533 AWN69_RS05980 WP_000644904.1 1212200..1213225(+) (cytR) [Escherichia coli str. K-12 substr. MG1655 strain JW5437-1]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628