Detailed information NTG0145456

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AX202_RS22530
• Genome accession: NZ_CP014316
• Coordinates: 4473647..4474672 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli JJ1887
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4468647..4479672

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AX202_RS22500 (AX202_22495)	zapB	4468731..4468976 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
AX202_RS22505 (AX202_22500)	rraA	4469061..4469546 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AX202_RS22510 (AX202_22505)	menA	4469639..4470565 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AX202_RS22515 (AX202_22510)	hslU	4470632..4471963 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
AX202_RS22520 (AX202_22515)	hslV	4471973..4472503 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AX202_RS22525 (AX202_22520)	ftsN	4472596..4473555 (-)	960	WP_000068834.1	cell division protein FtsN	-
AX202_RS22530 (AX202_22525)	cytR	4473647..4474672 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
AX202_RS22535 (AX202_22530)	priA	4474828..4477026 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
AX202_RS22540 (AX202_22535)	rpmE	4477229..4477441 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
AX202_RS22545 (AX202_22540)	yiiX	4477502..4478110 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
AX202_RS22550 (AX202_22545)	metJ	4478170..4478487 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=145456 AX202_RS22530 WP_000644908.1 4473647..4474672(-) (cytR) [Escherichia coli JJ1887]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=145456 AX202_RS22530 WP_000644908.1 4473647..4474672(-) (cytR) [Escherichia coli JJ1887]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625