Detailed information
Bioinformatically predicted
Overview
| Name | ddrB | Type | Machinery gene |
| Locus tag | SU48_RS10630 | Genome accession | NZ_CP011387 |
| Coordinates | 2333188..2333757 (+) | Length | 189 a.a. |
| NCBI ID | WP_064015236.1 | Uniprot ID | A0A172TB48 |
| Organism | Deinococcus puniceus strain DY1 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2328188..2338757
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SU48_RS10610 (SU48_10625) | - | 2329014..2330510 (-) | 1497 | WP_064015233.1 | carboxylesterase/lipase family protein | - |
| SU48_RS10615 (SU48_10630) | - | 2330677..2331588 (+) | 912 | WP_082869747.1 | MerR family transcriptional regulator | - |
| SU48_RS10620 (SU48_10635) | - | 2331754..2332461 (-) | 708 | WP_231881605.1 | EAL domain-containing protein | - |
| SU48_RS10625 (SU48_10640) | paaI | 2332696..2333091 (+) | 396 | WP_064015235.1 | hydroxyphenylacetyl-CoA thioesterase PaaI | - |
| SU48_RS10630 (SU48_10645) | ddrB | 2333188..2333757 (+) | 570 | WP_064015236.1 | single-stranded DNA-binding protein | Machinery gene |
| SU48_RS10635 (SU48_10650) | - | 2333849..2334307 (-) | 459 | WP_064015237.1 | hypothetical protein | - |
| SU48_RS10640 (SU48_10655) | - | 2334478..2334936 (-) | 459 | WP_064015238.1 | hypothetical protein | - |
| SU48_RS10645 (SU48_10660) | - | 2335328..2335921 (-) | 594 | WP_064016000.1 | metallophosphoesterase | - |
| SU48_RS10650 (SU48_10665) | - | 2336197..2336751 (+) | 555 | WP_064015239.1 | GNAT family N-acetyltransferase | - |
| SU48_RS10655 (SU48_10670) | rocF | 2336864..2337763 (+) | 900 | WP_064015240.1 | arginase | - |
Sequence
Protein
Download Length: 189 a.a. Molecular weight: 20699.12 Da Isoelectric Point: 6.8865
>NTDB_id=145371 SU48_RS10630 WP_064015236.1 2333188..2333757(+) (ddrB) [Deinococcus puniceus strain DY1]
MLHIEFITDLGARVTVDVDSADKLLDVQRQYGRLGWTSGELPSGGYQFPFDNEADFDWALLGARKYTTPEGEEMVYHKGH
GYRRRELEPVDSRKMKLPAAVKYSRGAKNSDPDHVREKADGEFEYVTLAIFRGGRRQERYAVPGGAAANAPRAAAAPAQA
APQRPRPAPTAAPRATGAAVAVAEEETPF
MLHIEFITDLGARVTVDVDSADKLLDVQRQYGRLGWTSGELPSGGYQFPFDNEADFDWALLGARKYTTPEGEEMVYHKGH
GYRRRELEPVDSRKMKLPAAVKYSRGAKNSDPDHVREKADGEFEYVTLAIFRGGRRQERYAVPGGAAANAPRAAAAPAQA
APQRPRPAPTAAPRATGAAVAVAEEETPF
Nucleotide
Download Length: 570 bp
>NTDB_id=145371 SU48_RS10630 WP_064015236.1 2333188..2333757(+) (ddrB) [Deinococcus puniceus strain DY1]
ATGTTGCATATCGAATTCATTACCGATCTGGGTGCGCGGGTCACGGTAGACGTGGACAGCGCCGACAAATTGCTGGATGT
TCAGCGTCAATACGGGCGCTTGGGCTGGACGAGCGGCGAGTTGCCGTCGGGCGGTTACCAGTTCCCCTTCGACAACGAGG
CCGACTTTGATTGGGCGCTGTTGGGCGCACGCAAATACACCACGCCCGAAGGCGAGGAAATGGTGTACCACAAAGGGCAC
GGTTACCGCCGCCGCGAACTGGAACCCGTGGACAGCCGCAAAATGAAGCTGCCCGCCGCCGTGAAGTACAGCCGGGGAGC
CAAAAACAGCGACCCAGACCACGTGCGCGAAAAAGCCGATGGCGAATTTGAATACGTGACGCTGGCGATTTTCCGGGGAG
GCCGCCGCCAAGAGCGGTACGCCGTTCCCGGAGGTGCAGCCGCCAACGCACCCCGAGCCGCCGCAGCCCCCGCCCAAGCC
GCCCCCCAGCGCCCCCGCCCGGCCCCCACCGCCGCGCCCAGAGCCACCGGAGCAGCAGTGGCGGTAGCAGAGGAAGAAAC
GCCGTTTTAA
ATGTTGCATATCGAATTCATTACCGATCTGGGTGCGCGGGTCACGGTAGACGTGGACAGCGCCGACAAATTGCTGGATGT
TCAGCGTCAATACGGGCGCTTGGGCTGGACGAGCGGCGAGTTGCCGTCGGGCGGTTACCAGTTCCCCTTCGACAACGAGG
CCGACTTTGATTGGGCGCTGTTGGGCGCACGCAAATACACCACGCCCGAAGGCGAGGAAATGGTGTACCACAAAGGGCAC
GGTTACCGCCGCCGCGAACTGGAACCCGTGGACAGCCGCAAAATGAAGCTGCCCGCCGCCGTGAAGTACAGCCGGGGAGC
CAAAAACAGCGACCCAGACCACGTGCGCGAAAAAGCCGATGGCGAATTTGAATACGTGACGCTGGCGATTTTCCGGGGAG
GCCGCCGCCAAGAGCGGTACGCCGTTCCCGGAGGTGCAGCCGCCAACGCACCCCGAGCCGCCGCAGCCCCCGCCCAAGCC
GCCCCCCAGCGCCCCCGCCCGGCCCCCACCGCCGCGCCCAGAGCCACCGGAGCAGCAGTGGCGGTAGCAGAGGAAGAAAC
GCCGTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ddrB | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
71.579 |
100 |
0.72 |