Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | SU48_RS02095 | Genome accession | NZ_CP011387 |
| Coordinates | 445300..445683 (-) | Length | 127 a.a. |
| NCBI ID | WP_064013802.1 | Uniprot ID | A0A172T6U7 |
| Organism | Deinococcus puniceus strain DY1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 440300..450683
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SU48_RS02070 (SU48_02080) | - | 441103..441780 (+) | 678 | WP_064013797.1 | V-type ATP synthase subunit D | - |
| SU48_RS02075 (SU48_02085) | - | 441833..442414 (-) | 582 | WP_231881659.1 | phosphohydrolase | - |
| SU48_RS02080 (SU48_02090) | - | 442404..443372 (-) | 969 | WP_064013799.1 | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | - |
| SU48_RS02085 (SU48_02095) | - | 443369..444142 (-) | 774 | WP_064013800.1 | class I SAM-dependent methyltransferase | - |
| SU48_RS02090 (SU48_02100) | - | 444151..444717 (-) | 567 | WP_064013801.1 | DUF1802 family protein | - |
| SU48_RS13865 (SU48_02105) | - | 444762..445151 (-) | 390 | WP_082869618.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| SU48_RS02095 (SU48_02110) | pilV | 445300..445683 (-) | 384 | WP_064013802.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| SU48_RS02100 (SU48_02115) | dnaB | 446108..448705 (+) | 2598 | WP_064013803.1 | replicative DNA helicase | - |
| SU48_RS02105 (SU48_02120) | - | 448705..449421 (+) | 717 | WP_064013804.1 | NUDIX domain-containing protein | - |
| SU48_RS13870 | - | 449526..449747 (+) | 222 | WP_082869619.1 | hypothetical protein | - |
| SU48_RS02110 (SU48_02125) | - | 449957..450670 (+) | 714 | WP_064013805.1 | SDR family NAD(P)-dependent oxidoreductase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 13195.15 Da Isoelectric Point: 8.5077
>NTDB_id=145359 SU48_RS02095 WP_064013802.1 445300..445683(-) (pilV) [Deinococcus puniceus strain DY1]
MKNNTQGFTLIELLIVIAIIGILAAVLIPNLLAARNRANDTATQSFIRNVVTGVETQRDSVTGALPATAPTCIVATGKTA
LPASVKSCAIILGTTNKDAFVVNASSINNTDYTYDSKEVKTGTSTAP
MKNNTQGFTLIELLIVIAIIGILAAVLIPNLLAARNRANDTATQSFIRNVVTGVETQRDSVTGALPATAPTCIVATGKTA
LPASVKSCAIILGTTNKDAFVVNASSINNTDYTYDSKEVKTGTSTAP
Nucleotide
Download Length: 384 bp
>NTDB_id=145359 SU48_RS02095 WP_064013802.1 445300..445683(-) (pilV) [Deinococcus puniceus strain DY1]
ATGAAGAACAACACCCAAGGCTTCACCCTGATCGAGCTGCTGATCGTCATCGCCATCATCGGTATTCTGGCCGCCGTGTT
GATTCCCAACCTGTTGGCTGCCCGTAATCGCGCCAACGATACTGCCACCCAATCGTTCATCCGTAATGTGGTTACTGGTG
TAGAAACCCAACGGGATAGCGTCACGGGTGCTTTGCCTGCAACTGCCCCCACCTGCATCGTCGCCACCGGCAAAACCGCC
CTGCCTGCCTCCGTCAAGTCTTGCGCGATTATTCTCGGCACCACCAACAAAGACGCTTTCGTCGTAAACGCCAGCTCCAT
CAACAACACCGACTACACCTACGACAGCAAAGAAGTTAAGACCGGAACCAGCACCGCTCCCTGA
ATGAAGAACAACACCCAAGGCTTCACCCTGATCGAGCTGCTGATCGTCATCGCCATCATCGGTATTCTGGCCGCCGTGTT
GATTCCCAACCTGTTGGCTGCCCGTAATCGCGCCAACGATACTGCCACCCAATCGTTCATCCGTAATGTGGTTACTGGTG
TAGAAACCCAACGGGATAGCGTCACGGGTGCTTTGCCTGCAACTGCCCCCACCTGCATCGTCGCCACCGGCAAAACCGCC
CTGCCTGCCTCCGTCAAGTCTTGCGCGATTATTCTCGGCACCACCAACAAAGACGCTTTCGTCGTAAACGCCAGCTCCAT
CAACAACACCGACTACACCTACGACAGCAAAGAAGTTAAGACCGGAACCAGCACCGCTCCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.163 |
100 |
0.52 |