Detailed information NTG0145294

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: C3026_RS21235
• Genome accession: NZ_CP014272
• Coordinates: 4227415..4228440 (-)
• Length: 341 a.a.
• NCBI ID: WP_061066762.1
• Uniprot ID: -
• Organism: Escherichia coli K-12 strain K-12 C3026
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4222415..4233440

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C3026_RS21205 (C3026_21230)	zapB	4222499..4222744 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
C3026_RS21210 (C3026_21235)	rraA	4222829..4223314 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
C3026_RS21215 (C3026_21240)	menA	4223407..4224333 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
C3026_RS21220 (C3026_21245)	hslU	4224400..4225731 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
C3026_RS21225 (C3026_21250)	hslV	4225741..4226271 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
C3026_RS21230 (C3026_21255)	ftsN	4226364..4227323 (-)	960	WP_000068828.1	cell division protein FtsN	-
C3026_RS21235 (C3026_21260)	cytR	4227415..4228440 (-)	1026	WP_061066762.1	DNA-binding transcriptional regulator CytR	Regulator
C3026_RS21240 (C3026_21265)	priA	4228596..4230794 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
C3026_RS21245 (C3026_21270)	rpmE	4230997..4231209 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
C3026_RS21250 (C3026_21275)	yiiX	4231270..4231878 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
C3026_RS21255 (C3026_21280)	metJ	4232062..4232379 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37877.82 Da
• Isoelectric Point: 6.1637

>NTDB_id=145294 C3026_RS21235 WP_061066762.1 4227415..4228440(-) (cytR) [Escherichia coli K-12 strain K-12 C3026]
MKAKKQETAATMKDVALKEKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=145294 C3026_RS21235 WP_061066762.1 4227415..4228440(-) (cytR) [Escherichia coli K-12 strain K-12 C3026]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGAAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625