Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   XI92_RS21750 Genome accession   NZ_CP011349
Coordinates   4119654..4120448 (+) Length   264 a.a.
NCBI ID   WP_021727703.1    Uniprot ID   A0A9X3FF97
Organism   Bacillus thuringiensis strain YC-10     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4114654..4125448
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  XI92_RS21730 (XI92_21730) argR 4115493..4115942 (+) 450 WP_001032580.1 arginine repressor ArgR -
  XI92_RS21735 (XI92_21735) recN 4116207..4117946 (+) 1740 WP_000947764.1 DNA repair protein RecN Machinery gene
  XI92_RS21740 (XI92_21740) spoIVB 4118065..4119363 (+) 1299 WP_002101312.1 SpoIVB peptidase -
  XI92_RS21750 (XI92_21750) spo0A 4119654..4120448 (+) 795 WP_021727703.1 sporulation transcription factor Spo0A Regulator
  XI92_RS21755 (XI92_21755) - 4120701..4121264 (+) 564 WP_000428227.1 PRK06770 family protein -
  XI92_RS21760 (XI92_21760) - 4121505..4121651 (-) 147 WP_001247671.1 YycC family protein -
  XI92_RS21765 (XI92_21765) - 4121702..4122430 (+) 729 WP_000172580.1 glycerophosphodiester phosphodiesterase -
  XI92_RS21770 (XI92_21770) - 4122480..4122713 (-) 234 WP_001190210.1 DUF2627 domain-containing protein -
  XI92_RS21775 (XI92_21775) - 4122851..4124923 (+) 2073 WP_000810974.1 sigma-54-dependent Fis family transcriptional regulator -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29445.20 Da        Isoelectric Point: 7.1175

>NTDB_id=145012 XI92_RS21750 WP_021727703.1 4119654..4120448(+) (spo0A) [Bacillus thuringiensis strain YC-10]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLKQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANTMIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=145012 XI92_RS21750 WP_021727703.1 4119654..4120448(+) (spo0A) [Bacillus thuringiensis strain YC-10]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAACTAGTATCAATGTTAGAGAGCTATGTAGCCGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAACAGATAAGCAACCTGATGTACTCG
TTTTAGACATTATTATGCCACACTTAGATGGTTTAGCTGTATTGGAGAAAATGCGACATATTGAAAGGTTAAAACAGCCT
AGCGTAATTATGTTGACAGCATTTGGCCAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCCTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGTGGTAAAGCAAACACTATGATTAAGCGTCCAC
TACCATCATTCCGATCAGCCACAACAGTAGATGGAAAACCGAAAAACTTAGATGCGAGTATTACGAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGATATATGTATTTACGAGAAGCAATCTCCATGGTATACAATGATATCGAATTATT
AGGATCGATTACGAAAGTATTGTATCCAGATATCGCAAAGAAATATAATACAACAGCAAGCCGTGTGGAGCGCGCAATTC
GTCACGCAATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCTGAGTTTATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAAGCTAGTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818

Multiple sequence alignment