Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AAV30_RS13630 Genome accession   NZ_CP011347
Coordinates   2844932..2845123 (-) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain YJ11-1-4     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2839932..2850123
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAV30_RS13605 (AAV30_13605) - 2840291..2841277 (-) 987 WP_038457614.1 ABC transporter ATP-binding protein -
  AAV30_RS13610 (AAV30_13610) - 2841451..2842236 (-) 786 WP_029325951.1 DUF2268 domain-containing protein -
  AAV30_RS13615 (AAV30_13615) fabF 2842319..2843557 (-) 1239 WP_007610580.1 beta-ketoacyl-ACP synthase II -
  AAV30_RS13620 (AAV30_13620) - 2843579..2844517 (-) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  AAV30_RS13625 (AAV30_13625) - 2844685..2844903 (+) 219 WP_007610579.1 hypothetical protein -
  AAV30_RS13630 (AAV30_13630) comZ 2844932..2845123 (-) 192 WP_003155061.1 ComZ family protein Regulator
  AAV30_RS13635 (AAV30_13635) med 2845136..2846089 (-) 954 WP_007409125.1 BMP family ABC transporter substrate-binding protein Regulator
  AAV30_RS13640 (AAV30_13640) - 2846179..2846745 (-) 567 WP_038457612.1 hypothetical protein -
  AAV30_RS13645 (AAV30_13645) - 2846828..2847562 (-) 735 WP_038457610.1 hypothetical protein -
  AAV30_RS13655 (AAV30_13655) - 2847823..2848008 (+) 186 WP_007409129.1 YjzD family protein -
  AAV30_RS13660 (AAV30_13660) - 2848045..2848224 (-) 180 WP_003155070.1 YjzC family protein -
  AAV30_RS13665 (AAV30_13665) argF 2848300..2849271 (-) 972 WP_038457606.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=144948 AAV30_RS13630 WP_003155061.1 2844932..2845123(-) (comZ) [Bacillus velezensis strain YJ11-1-4]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=144948 AAV30_RS13630 WP_003155061.1 2844932..2845123(-) (comZ) [Bacillus velezensis strain YJ11-1-4]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment