Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   AAV30_RS07710 Genome accession   NZ_CP011347
Coordinates   1504876..1505676 (+) Length   266 a.a.
NCBI ID   WP_003153177.1    Uniprot ID   I2C7K5
Organism   Bacillus velezensis strain YJ11-1-4     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1499876..1510676
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAV30_RS07690 (AAV30_07690) - 1499998..1500843 (+) 846 WP_007612503.1 TlyA family RNA methyltransferase -
  AAV30_RS07695 (AAV30_07695) ahrC 1500940..1501389 (+) 450 WP_003153173.1 transcriptional regulator AhrC/ArgR -
  AAV30_RS07700 (AAV30_07700) recN 1501421..1503151 (+) 1731 WP_038459152.1 DNA repair protein RecN Machinery gene
  AAV30_RS07705 (AAV30_07705) spoIVB 1503315..1504595 (+) 1281 WP_038459150.1 SpoIVB peptidase -
  AAV30_RS07710 (AAV30_07710) spo0A 1504876..1505676 (+) 801 WP_003153177.1 sporulation transcription factor Spo0A Regulator
  AAV30_RS07715 (AAV30_07715) alr 1505825..1507005 (-) 1181 Protein_1537 alanine racemase -
  AAV30_RS07720 (AAV30_07720) - 1507182..1507394 (-) 213 WP_038459145.1 spore germination protein -
  AAV30_RS07725 (AAV30_07725) - 1507520..1507732 (-) 213 WP_007408362.1 spore germination protein -
  AAV30_RS07730 (AAV30_07730) - 1507859..1508977 (-) 1119 WP_038460835.1 NADH-dependent flavin oxidoreductase -
  AAV30_RS20180 (AAV30_07735) - 1509071..1509208 (-) 138 WP_014470646.1 hypothetical protein -
  AAV30_RS07740 (AAV30_07740) - 1509505..1510137 (-) 633 WP_014418348.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29630.11 Da        Isoelectric Point: 6.1630

>NTDB_id=144934 AAV30_RS07710 WP_003153177.1 1504876..1505676(+) (spo0A) [Bacillus velezensis strain YJ11-1-4]
MEKIKVCVADDNRELVSLLSEYIEGQDDMEVIGVAYNGQECLSLFKDKNPDVLVLDIIMPHLDGLAVLERLRESELEKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNVSSVTHRAPSAQSSIIRSQPEPKRKNLDASITSII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=144934 AAV30_RS07710 WP_003153177.1 1504876..1505676(+) (spo0A) [Bacillus velezensis strain YJ11-1-4]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTTGTAAGCCTGTTGAGTGAATATATAGAGGGACAGGA
TGATATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGTCTTTCTTTGTTTAAAGATAAGAATCCCGATGTGCTCG
TTTTAGACATTATCATGCCGCATCTGGACGGACTTGCGGTTTTGGAGCGTCTGCGGGAATCAGAGCTCGAGAAGCAGCCG
AACGTCATCATGCTGACGGCATTCGGTCAGGAAGACGTTACGAAAAAAGCCGTCGATTTAGGCGCGTCCTATTTCATCCT
GAAGCCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTAAGCGGAAATGTCAGCAGTGTCACACACCGTGCGC
CGTCTGCGCAAAGCAGCATTATCCGCAGCCAGCCGGAGCCGAAGCGGAAAAATCTCGATGCCAGCATTACAAGCATTATC
CATGAGATCGGTGTGCCTGCCCATATCAAAGGCTATCTTTATTTGCGTGAAGCCATTTCCATGGTGTATAACGATATTGA
ACTCCTCGGCAGCATCACAAAAGTCCTTTATCCCGACATCGCCAAAAAATTCAACACGACCGCAAGCCGTGTAGAACGGG
CCATCCGCCACGCCATTGAAGTCGCATGGAGCAGGGGAAATATTGATTCCATTTCTTCACTGTTCGGATATACGGTAAGC
ATGACAAAAGCAAAACCAACCAATTCAGAATTCATCGCGATGGTTGCTGATAAGCTGAGATTGGAGCATAAAGCTTCGTA
A

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C7K5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

96.629

100

0.97

Multiple sequence alignment