Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA/nlmT   Type   Regulator
Locus tag   AXE82_RS12095 Genome accession   NZ_CP014234
Coordinates   1168405..1168548 (-) Length   47 a.a.
NCBI ID   WP_156627504.1    Uniprot ID   -
Organism   Moraxella osloensis strain CCUG 350     
Function   transport of ComC (predicted from homology)   
Competence regulation

Genomic Context

Location: 1163405..1173548
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AXE82_RS05060 (AXE82_05055) - 1163852..1165081 (+) 1230 WP_062332136.1 toxic anion resistance protein -
  AXE82_RS05065 (AXE82_05060) - 1165328..1166485 (-) 1158 WP_060994548.1 5-(carboxyamino)imidazole ribonucleotide synthase -
  AXE82_RS05070 (AXE82_05065) - 1166641..1166946 (-) 306 WP_007117138.1 hypothetical protein -
  AXE82_RS05075 (AXE82_05070) - 1167624..1168262 (-) 639 WP_007117140.1 MarC family protein -
  AXE82_RS12095 comA/nlmT 1168405..1168548 (-) 144 WP_156627504.1 hypothetical protein Regulator
  AXE82_RS05080 (AXE82_05075) - 1168703..1170523 (+) 1821 WP_062332139.1 acyl-CoA dehydrogenase C-terminal domain-containing protein -
  AXE82_RS05085 (AXE82_05080) - 1170625..1171530 (+) 906 WP_062334790.1 polyprenyl synthetase family protein -
  AXE82_RS05090 (AXE82_05085) - 1171571..1172146 (+) 576 WP_062332142.1 hypothetical protein -
  AXE82_RS05095 (AXE82_05090) - 1172164..1172811 (-) 648 WP_062332145.1 RDD family protein -
  AXE82_RS05100 (AXE82_05095) - 1172877..1173059 (+) 183 WP_062332149.1 hypothetical protein -

Sequence

Protein


Download         Length: 47 a.a.        Molecular weight: 5475.10 Da        Isoelectric Point: 4.8565

>NTDB_id=144846 AXE82_RS12095 WP_156627504.1 1168405..1168548(-) (comA/nlmT) [Moraxella osloensis strain CCUG 350]
MVIEQGRVVETGTHDELYRKQGKYYEIFNAMSDSLNLDKITQTLDSH

Nucleotide


Download         Length: 144 bp        

>NTDB_id=144846 AXE82_RS12095 WP_156627504.1 1168405..1168548(-) (comA/nlmT) [Moraxella osloensis strain CCUG 350]
GTGGTCATCGAGCAAGGGCGCGTGGTGGAGACAGGCACGCATGATGAACTGTATCGCAAGCAAGGCAAATACTATGAGAT
TTTTAATGCCATGTCCGATAGTTTAAATCTTGATAAAATCACCCAAACGTTAGACAGCCACTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/nlmT Streptococcus mutans UA159

58.621

61.702

0.362

Multiple sequence alignment