Detailed information
Bioinformatically predicted
Overview
| Name | sepM | Type | Regulator |
| Locus tag | AWM80_RS08215 | Genome accession | NZ_CP014166 |
| Coordinates | 1552032..1553057 (+) | Length | 341 a.a. |
| NCBI ID | WP_003245451.1 | Uniprot ID | O34470 |
| Organism | Bacillus subtilis subsp. subtilis strain CU1050 | ||
| Function | processing of CSP (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1547032..1558057
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AWM80_RS08180 (AWM80_08185) | ylbE | 1547332..1547571 (+) | 240 | WP_003232231.1 | YlbE-like family protein | - |
| AWM80_RS08185 (AWM80_08190) | ylbF | 1547687..1548136 (+) | 450 | WP_003221370.1 | regulatory iron-sulfur-containing complex subunit RicF | Regulator |
| AWM80_RS08190 (AWM80_08195) | ylbG | 1548191..1548463 (+) | 273 | WP_009967171.1 | YlbG family protein | - |
| AWM80_RS08195 (AWM80_08200) | rsmD | 1548786..1549340 (+) | 555 | WP_003232227.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| AWM80_RS08200 (AWM80_08205) | coaD | 1549345..1549830 (+) | 486 | WP_003245283.1 | pantetheine-phosphate adenylyltransferase | - |
| AWM80_RS08205 (AWM80_08210) | spoVV | 1549841..1551067 (-) | 1227 | WP_003245492.1 | dipicolinic acid transporter SpoVV | - |
| AWM80_RS08210 (AWM80_08215) | ylbK | 1551248..1552030 (+) | 783 | WP_003232221.1 | patatin family protein | - |
| AWM80_RS08215 (AWM80_08220) | sepM | 1552032..1553057 (+) | 1026 | WP_003245451.1 | protease DdcP | Regulator |
| AWM80_RS08220 (AWM80_08225) | tmcAL | 1553074..1554321 (-) | 1248 | WP_003244707.1 | nucleotidyltransferase | - |
| AWM80_RS08225 (AWM80_08230) | - | 1554318..1554503 (-) | 186 | WP_003232215.1 | hypothetical protein | - |
| AWM80_RS08230 (AWM80_08235) | ylbN | 1554531..1555049 (+) | 519 | WP_003232214.1 | YceD family protein | - |
| AWM80_RS08235 (AWM80_08240) | rpmF | 1555071..1555250 (+) | 180 | WP_003154457.1 | 50S ribosomal protein L32 | - |
| AWM80_RS08240 (AWM80_08245) | gerR | 1555396..1555977 (+) | 582 | WP_003232210.1 | sporulation specific transcriptional regulator GerR | - |
| AWM80_RS08245 (AWM80_08250) | ylbP | 1556034..1556516 (-) | 483 | WP_003244940.1 | N-acetyltransferase | - |
| AWM80_RS08250 (AWM80_08255) | panEA | 1556676..1557572 (+) | 897 | WP_003232206.1 | 2-dehydropantoate 2-reductase | - |
Sequence
Protein
Download Length: 341 a.a. Molecular weight: 37651.23 Da Isoelectric Point: 6.5347
>NTDB_id=144547 AWM80_RS08215 WP_003245451.1 1552032..1553057(+) (sepM) [Bacillus subtilis subsp. subtilis strain CU1050]
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEEGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNAVKTAKDIDSNMKI
VPVDTMQDAIDYLNKLKAKST
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEEGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNAVKTAKDIDSNMKI
VPVDTMQDAIDYLNKLKAKST
Nucleotide
Download Length: 1026 bp
>NTDB_id=144547 AWM80_RS08215 WP_003245451.1 1552032..1553057(+) (sepM) [Bacillus subtilis subsp. subtilis strain CU1050]
TTGCTACGTAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGTC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCATTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAGGAAGGCGAATCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGCTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTCAGCTATTCCTTTAACGGCATATACGCAAGCT
CAGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGAGATAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGGTAGAGCCTGATATTGATTTTGAAATCGAAAATATTGGCGGCCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACGATTGATGTTGA
CGGAAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCAGTAAAAACAGCAAAAGATATTGATTCAAATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA
TTGCTACGTAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGTC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCATTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAGGAAGGCGAATCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGCTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTCAGCTATTCCTTTAACGGCATATACGCAAGCT
CAGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGAGATAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGGTAGAGCCTGATATTGATTTTGAAATCGAAAATATTGGCGGCCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACGATTGATGTTGA
CGGAAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCAGTAAAAACAGCAAAAGATATTGATTCAAATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sepM | Streptococcus mutans UA159 |
39.143 |
100 |
0.402 |