Detailed information NTG0144462

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: YQ44_RS22605
• Genome accession: NZ_CP011319
• Coordinates: 5243861..5244928 (+)
• Length: 355 a.a.
• NCBI ID: WP_071325301.1
• Uniprot ID: A0A1I9Y274
• Organism: Janthinobacterium sp. 1_2014MBL_MicDiv
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5238861..5249928

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
YQ44_RS22585 (YQ44_22610)	-	5239231..5240460 (-)	1230	WP_156894954.1	cyclopropane-fatty-acyl-phospholipid synthase family protein	-
YQ44_RS22590 (YQ44_22615)	-	5240457..5241254 (-)	798	WP_232250972.1	DUF1365 domain-containing protein	-
YQ44_RS22595 (YQ44_22620)	-	5241244..5242554 (-)	1311	WP_071325299.1	FAD-dependent oxidoreductase	-
YQ44_RS22600 (YQ44_22625)	-	5242755..5243705 (+)	951	WP_071325300.1	MerR family transcriptional regulator	-
YQ44_RS22605 (YQ44_22630)	pilA	5243861..5244928 (+)	1068	WP_071325301.1	signal recognition particle-docking protein FtsY	Machinery gene
YQ44_RS22610 (YQ44_22635)	-	5244937..5245686 (+)	750	WP_071325302.1	ATP-binding cassette domain-containing protein	-
YQ44_RS22615 (YQ44_22640)	ftsX	5245683..5246603 (+)	921	WP_071325303.1	permease-like cell division protein FtsX	-
YQ44_RS22620 (YQ44_22645)	rpoH	5247060..5247959 (+)	900	WP_198043802.1	RNA polymerase sigma factor RpoH	-
YQ44_RS22625 (YQ44_22650)	-	5248050..5248316 (-)	267	WP_071325305.1	hypothetical protein	-
YQ44_RS22630 (YQ44_22655)	-	5248495..5248947 (+)	453	WP_071325306.1	hypothetical protein	-
YQ44_RS22635 (YQ44_22660)	-	5248944..5249297 (-)	354	WP_071325307.1	antibiotic biosynthesis monooxygenase	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 37534.85 Da
• Isoelectric Point: 6.8950

>NTDB_id=144462 YQ44_RS22605 WP_071325301.1 5243861..5244928(+) (pilA) [Janthinobacterium sp. 1_2014MBL_MicDiv]
MFSFFKKKPAAPEALPVSVEPAPPPAATVPPPAAPAAAPLSGAPAELVPVVVAAEPEKKSWMTRLKAGLSKTSNTLSVLF
VGAKIDDALYEELEAALLMSDAGIDATEFLLTELKKKVKEDKLLDAAAVKAALKVLLIDLLTPLEKRFELGRHKPLVMMI
SGVNGAGKTTTIGKLAKHMQSNNQSVLLAAGDTFRAAAREQLMVWGERNNVTVISQESGDPAAVAYDSVQSAKARGIDVV
MVDTAGRLPTQLHLMEELKKIKRVIGKGMEGAPHETLLVIDGNTGQNALTQVKAFDDALQLSGLVITKLDGTAKGGVLAA
IARVRPVPVYFIGIGEKIEDLQPFVAAEFVEALLG

Nucleotide

• Length: 1068 bp

>NTDB_id=144462 YQ44_RS22605 WP_071325301.1 5243861..5244928(+) (pilA) [Janthinobacterium sp. 1_2014MBL_MicDiv]
ATGTTTAGTTTCTTCAAGAAAAAACCCGCCGCCCCTGAAGCCCTGCCTGTCAGTGTCGAGCCTGCTCCCCCTCCCGCCGC
CACTGTCCCGCCGCCTGCCGCCCCTGCCGCTGCGCCCCTGAGCGGCGCGCCGGCCGAGCTCGTGCCCGTGGTCGTGGCTG
CCGAACCCGAGAAAAAATCGTGGATGACGCGCCTGAAGGCGGGCCTGTCGAAGACGTCGAATACCCTGTCCGTGCTGTTC
GTCGGCGCGAAGATCGACGACGCCCTGTACGAAGAGCTGGAAGCGGCGCTGCTGATGTCCGACGCCGGCATCGACGCCAC
GGAATTCCTGCTGACGGAACTGAAGAAAAAGGTCAAGGAAGACAAGCTGCTCGACGCCGCCGCCGTCAAGGCCGCGCTGA
AAGTGCTGCTGATCGACCTGCTGACACCGCTGGAAAAGCGTTTCGAGCTGGGCCGCCACAAGCCGCTCGTGATGATGATT
TCCGGCGTGAATGGCGCCGGCAAGACCACCACCATCGGCAAGCTGGCCAAGCACATGCAGTCGAATAACCAGTCCGTGCT
GCTGGCCGCGGGCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGATGGTGTGGGGCGAGCGCAACAACGTGACCGTGA
TTTCGCAGGAATCGGGCGACCCGGCCGCCGTGGCCTACGACTCCGTGCAGTCGGCCAAGGCGCGCGGCATCGACGTGGTG
ATGGTCGACACGGCGGGACGCCTGCCGACGCAGTTGCACCTGATGGAAGAATTGAAGAAAATCAAGCGCGTGATCGGCAA
GGGCATGGAAGGCGCGCCGCATGAAACCCTGCTCGTCATCGACGGCAACACGGGCCAGAACGCCTTGACGCAGGTCAAGG
CGTTTGATGACGCCCTGCAGCTGAGCGGCCTGGTGATCACCAAGCTCGATGGCACGGCCAAGGGCGGCGTGCTGGCGGCG
ATTGCCCGCGTGCGCCCCGTGCCCGTGTATTTCATCGGCATCGGTGAGAAAATTGAAGACTTGCAGCCCTTCGTGGCTGC
CGAATTTGTCGAAGCGCTGCTCGGATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (156-355)

• SRP54-type protein, helical bundle domain (SRP54_N) (74-134)

3D structure

• AlphaFold DB: A0A1I9Y274

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	54.121	100	0.555