Detailed information NTG0144348

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AL502_RS19215
• Genome accession: NZ_CP014111
• Coordinates: 3554040..3555065 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain FDAARGOS_144
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3549040..3560065

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AL502_RS19185 (AL502_19680)	zapB	3549124..3549369 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
AL502_RS19190 (AL502_19685)	rraA	3549454..3549939 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AL502_RS19195 (AL502_19690)	menA	3550032..3550958 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AL502_RS19200 (AL502_19695)	hslU	3551025..3552356 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
AL502_RS19205 (AL502_19700)	hslV	3552366..3552896 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AL502_RS19210 (AL502_19705)	ftsN	3552989..3553948 (-)	960	WP_000068845.1	cell division protein FtsN	-
AL502_RS19215 (AL502_19710)	cytR	3554040..3555065 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
AL502_RS19220 (AL502_19715)	priA	3555221..3557419 (-)	2199	WP_001523603.1	primosomal protein N'	Machinery gene
AL502_RS19225 (AL502_19720)	rpmE	3557622..3557834 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
AL502_RS19230 (AL502_19725)	yiiX	3557895..3558503 (-)	609	WP_022296244.1	YiiX family permuted papain-like enzyme	-
AL502_RS19235 (AL502_19730)	metJ	3558563..3558880 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=144348 AL502_RS19215 WP_000644908.1 3554040..3555065(-) (cytR) [Escherichia coli strain FDAARGOS_144]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=144348 AL502_RS19215 WP_000644908.1 3554040..3555065(-) (cytR) [Escherichia coli strain FDAARGOS_144]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTAATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625