Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   XM40_RS19975 Genome accession   NZ_CP011278
Coordinates   326900..327064 (+) Length   54 a.a.
NCBI ID   WP_269465305.1    Uniprot ID   -
Organism   Bacillus velezensis strain L-S60     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 321900..332064
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  XM40_RS19970 srfAB 323791..326883 (+) 3093 Protein_299 surfactin non-ribosomal peptide synthetase SrfAB -
  XM40_RS19975 comS 326900..327064 (+) 165 WP_269465305.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6264.26 Da        Isoelectric Point: 11.7559

>NTDB_id=144159 XM40_RS19975 WP_269465305.1 326900..327064(+) (comS) [Bacillus velezensis strain L-S60]
MRPRRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=144159 XM40_RS19975 WP_269465305.1 326900..327064(+) (comS) [Bacillus velezensis strain L-S60]
ATGAGACCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5

Multiple sequence alignment