Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   WV34_RS07640 Genome accession   NZ_CP011252
Coordinates   1444016..1444480 (-) Length   154 a.a.
NCBI ID   WP_013352067.1    Uniprot ID   A0AAP7TCI0
Organism   Bacillus amyloliquefaciens strain MT45     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1439016..1449480
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WV34_RS07615 (WV34_07450) - 1439495..1441315 (+) 1821 WP_088612723.1 PAS domain-containing protein -
  WV34_RS07620 (WV34_07455) - 1441340..1442509 (-) 1170 WP_088612724.1 aminotransferase A -
  WV34_RS20130 - 1442711..1442872 (-) 162 WP_013352065.1 hypothetical protein -
  WV34_RS07635 (WV34_07460) cheV 1443061..1443972 (+) 912 WP_013352066.1 chemotaxis protein CheV -
  WV34_RS07640 (WV34_07465) kre 1444016..1444480 (-) 465 WP_013352067.1 YkyB family protein Regulator
  WV34_RS07645 (WV34_07470) - 1444603..1445895 (-) 1293 WP_088612726.1 MFS transporter -
  WV34_RS07650 (WV34_07475) - 1445971..1446465 (-) 495 WP_088613850.1 L,D-transpeptidase family protein -
  WV34_RS07655 (WV34_07480) - 1446540..1447403 (-) 864 WP_088612727.1 metallophosphoesterase -
  WV34_RS07660 (WV34_07485) fadH 1447547..1448311 (+) 765 WP_071346905.1 2,4-dienoyl-CoA reductase -
  WV34_RS07665 (WV34_07490) - 1448425..1448973 (+) 549 WP_088612728.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17798.57 Da        Isoelectric Point: 10.4864

>NTDB_id=143878 WV34_RS07640 WP_013352067.1 1444016..1444480(-) (kre) [Bacillus amyloliquefaciens strain MT45]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNLLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=143878 WV34_RS07640 WP_013352067.1 1444016..1444480(-) (kre) [Bacillus amyloliquefaciens strain MT45]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACTTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCCCTTGCCG
CCAACAGACAGCAGCCCGCTTATCATAAACCCGTGTTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

93.506

100

0.935

Multiple sequence alignment