Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   WV34_RS06200 Genome accession   NZ_CP011252
Coordinates   1186986..1187177 (+) Length   63 a.a.
NCBI ID   WP_013351814.1    Uniprot ID   A0AAP7TCS9
Organism   Bacillus amyloliquefaciens strain MT45     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1181986..1192177
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WV34_RS06165 (WV34_06055) argF 1182828..1183784 (+) 957 WP_088612583.1 ornithine carbamoyltransferase -
  WV34_RS06170 (WV34_06060) - 1183876..1184055 (+) 180 WP_013351809.1 YjzC family protein -
  WV34_RS06175 (WV34_06065) - 1184096..1184284 (-) 189 WP_013351810.1 YjzD family protein -
  WV34_RS06185 (WV34_06070) - 1184545..1185279 (+) 735 WP_045507014.1 hypothetical protein -
  WV34_RS06190 (WV34_06075) - 1185360..1185926 (+) 567 WP_088612585.1 hypothetical protein -
  WV34_RS06195 (WV34_06080) med 1186020..1186973 (+) 954 WP_013351813.1 BMP family ABC transporter substrate-binding protein Regulator
  WV34_RS06200 (WV34_06085) comZ 1186986..1187177 (+) 192 WP_013351814.1 ComZ family protein Regulator
  WV34_RS06205 (WV34_06090) - 1187206..1187424 (-) 219 WP_088612586.1 hypothetical protein -
  WV34_RS06210 (WV34_06095) - 1187590..1188528 (+) 939 WP_013351816.1 beta-ketoacyl-ACP synthase III -
  WV34_RS06215 (WV34_06100) fabF 1188552..1189790 (+) 1239 WP_088612587.1 beta-ketoacyl-ACP synthase II -
  WV34_RS06220 (WV34_06105) - 1189874..1190659 (+) 786 WP_088612588.1 DUF2268 domain-containing protein -
  WV34_RS06225 (WV34_06110) - 1190833..1191819 (+) 987 WP_014470616.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7202.35 Da        Isoelectric Point: 4.3344

>NTDB_id=143871 WV34_RS06200 WP_013351814.1 1186986..1187177(+) (comZ) [Bacillus amyloliquefaciens strain MT45]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMNLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=143871 WV34_RS06200 WP_013351814.1 1186986..1187177(+) (comZ) [Bacillus amyloliquefaciens strain MT45]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
AGGCATTGATCTGTCTATGGAAATGATTCAGCCGTTCATGAACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

87.931

92.063

0.81

Multiple sequence alignment