Detailed information NTG0143629

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: SMQ301_RS05540
• Genome accession: NZ_CP011217
• Coordinates: 1044778..1045659 (-)
• Length: 293 a.a.
• NCBI ID: WP_011681210.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain SMQ-301
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1039778..1050659

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SMQ301_RS05515 (SMQ301_1129)	vicR	1040485..1041192 (-)	708	WP_011681206.1	response regulator YycF	Regulator
SMQ301_RS05520 (SMQ301_1131)	-	1041716..1042483 (+)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
SMQ301_RS05525 (SMQ301_1132)	-	1042495..1043328 (+)	834	WP_011681208.1	transporter substrate-binding domain-containing protein	-
SMQ301_RS05530 (SMQ301_1133)	-	1043346..1044044 (+)	699	WP_011681209.1	amino acid ABC transporter permease	-
SMQ301_RS05535 (SMQ301_1134)	-	1044056..1044706 (+)	651	WP_011226088.1	amino acid ABC transporter permease	-
SMQ301_RS05540 (SMQ301_1135)	endA	1044778..1045659 (-)	882	WP_011681210.1	DNA/RNA non-specific endonuclease	Machinery gene
SMQ301_RS05545 (SMQ301_1136)	-	1045721..1045909 (-)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
SMQ301_RS05550 (SMQ301_1137)	murA	1045911..1047182 (-)	1272	WP_011681211.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
SMQ301_RS05555 (SMQ301_1138)	-	1047252..1047488 (-)	237	WP_002946959.1	DUF1146 family protein	-
SMQ301_RS05560 (SMQ301_1139)	galE	1047676..1048689 (-)	1014	WP_011681212.1	UDP-glucose 4-epimerase GalE	-
SMQ301_RS10435 (SMQ301_1140)	-	1048704..1049207 (-)	504	WP_011681213.1	hypothetical protein	-
SMQ301_RS10440 (SMQ301_1141)	-	1049197..1049649 (-)	453	WP_011681214.1	hypothetical protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31773.50 Da
• Isoelectric Point: 10.1789

>NTDB_id=143629 SMQ301_RS05540 WP_011681210.1 1044778..1045659(-) (endA) [Streptococcus thermophilus strain SMQ-301]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=143629 SMQ301_RS05540 WP_011681210.1 1044778..1045659(-) (endA) [Streptococcus thermophilus strain SMQ-301]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTGGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.803	81.57	0.594
endA	Streptococcus pneumoniae D39	72.803	81.57	0.594
endA	Streptococcus pneumoniae R6	72.803	81.57	0.594
endA	Streptococcus pneumoniae TIGR4	72.803	81.57	0.594