Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   AVT04_RS09125 Genome accession   NZ_CP013939
Coordinates   1723200..1723682 (+) Length   160 a.a.
NCBI ID   WP_011226072.1    Uniprot ID   Q5M461
Organism   Streptococcus thermophilus strain S9     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1718200..1728682
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AVT04_RS09105 (AVT04_09105) queG 1719073..1720191 (+) 1119 WP_059257434.1 tRNA epoxyqueuosine(34) reductase QueG -
  AVT04_RS09110 (AVT04_09110) prfB 1720244..1721342 (+) 1099 WP_096811488.1 peptide chain release factor 2 -
  AVT04_RS09115 (AVT04_09115) ftsE 1721430..1722122 (+) 693 WP_041827149.1 cell division ATP-binding protein FtsE -
  AVT04_RS09120 (AVT04_09120) ftsX 1722115..1723044 (+) 930 WP_011681194.1 permease-like cell division protein FtsX -
  AVT04_RS09125 (AVT04_09125) mutX 1723200..1723682 (+) 483 WP_011226072.1 NUDIX hydrolase Machinery gene
  AVT04_RS09130 (AVT04_09130) - 1723693..1724871 (+) 1179 WP_011227264.1 AI-2E family transporter -
  AVT04_RS09135 (AVT04_09135) - 1724861..1726090 (+) 1230 WP_002953086.1 tetratricopeptide repeat protein -
  AVT04_RS09140 (AVT04_09140) lepB 1726213..1726770 (+) 558 WP_002953084.1 signal peptidase I -
  AVT04_RS09145 (AVT04_09145) pepT 1726979..1728202 (+) 1224 WP_011226068.1 peptidase T -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18869.36 Da        Isoelectric Point: 4.7200

>NTDB_id=143273 AVT04_RS09125 WP_011226072.1 1723200..1723682(+) (mutX) [Streptococcus thermophilus strain S9]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=143273 AVT04_RS09125 WP_011226072.1 1723200..1723682(+) (mutX) [Streptococcus thermophilus strain S9]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M461

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706