Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   AV644_RS03565 Genome accession   NZ_CP013908
Coordinates   637136..637324 (+) Length   62 a.a.
NCBI ID   WP_000886223.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain GBS-M002     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 632136..642324
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AV644_RS03535 - 632162..632344 (+) 183 Protein_598 DUF6900 domain-containing protein -
  AV644_RS03540 (AV644_03410) metK 632398..633435 (+) 1038 WP_000640709.1 methionine adenosyltransferase -
  AV644_RS03545 (AV644_03415) - 633437..633802 (+) 366 WP_001138027.1 HNH endonuclease -
  AV644_RS03550 (AV644_03420) - 634120..634575 (+) 456 WP_000999416.1 hypothetical protein -
  AV644_RS03555 (AV644_03425) - 634547..635803 (+) 1257 WP_000211738.1 site-specific DNA-methyltransferase -
  AV644_RS03560 (AV644_03430) - 635800..637071 (+) 1272 WP_001241132.1 DNA cytosine methyltransferase -
  AV644_RS03565 (AV644_03435) prx 637136..637324 (+) 189 WP_000886223.1 hypothetical protein Regulator
  AV644_RS03570 (AV644_03440) - 637395..637619 (+) 225 WP_000158644.1 hypothetical protein -
  AV644_RS03575 (AV644_03445) - 637734..637988 (+) 255 WP_000211844.1 hypothetical protein -
  AV644_RS03580 (AV644_03450) - 637990..638199 (+) 210 WP_000998225.1 DUF4314 domain-containing protein -
  AV644_RS03585 (AV644_03455) - 638248..638721 (+) 474 WP_001007669.1 phage terminase small subunit P27 family -
  AV644_RS03590 (AV644_03460) - 638718..640310 (+) 1593 WP_000220981.1 terminase large subunit -
  AV644_RS03595 (AV644_03465) - 640377..640670 (+) 294 WP_000024184.1 hypothetical protein -
  AV644_RS03600 (AV644_03470) - 640663..641001 (+) 339 WP_000181405.1 type II toxin-antitoxin system RelE/ParE family toxin -
  AV644_RS03605 (AV644_03475) - 641085..641324 (+) 240 WP_000024081.1 hypothetical protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7075.21 Da        Isoelectric Point: 4.0548

>NTDB_id=143034 AV644_RS03565 WP_000886223.1 637136..637324(+) (prx) [Streptococcus agalactiae strain GBS-M002]
MLDLNDFMKEVKSGRISKDSIRVVRLNGVIIDYVLPQESVSENEVVEVMTLNDMVAEIFELC

Nucleotide


Download         Length: 189 bp        

>NTDB_id=143034 AV644_RS03565 WP_000886223.1 637136..637324(+) (prx) [Streptococcus agalactiae strain GBS-M002]
ATGCTTGATTTGAATGATTTTATGAAAGAGGTAAAGAGTGGACGTATCTCTAAAGATAGCATCAGAGTTGTTCGTCTAAA
TGGTGTGATTATTGATTACGTTCTTCCTCAGGAATCGGTGAGTGAGAATGAGGTTGTTGAAGTAATGACTTTGAATGACA
TGGTAGCGGAGATTTTTGAACTCTGTTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

41.379

93.548

0.387

Multiple sequence alignment