Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   WR51_RS20160 Genome accession   NZ_CP011153
Coordinates   4084352..4084810 (+) Length   152 a.a.
NCBI ID   WP_000804864.1    Uniprot ID   -
Organism   Bacillus cereus strain CMCC P0011     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 4079352..4089810
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WR51_RS20145 (WR51_20630) - 4080020..4080256 (+) 237 WP_000283738.1 hypothetical protein -
  WR51_RS20150 (WR51_20635) - 4080419..4082527 (-) 2109 WP_063548519.1 polyphosphate kinase -
  WR51_RS20155 (WR51_20640) - 4082636..4084210 (-) 1575 WP_063548521.1 Ppx/GppA family phosphatase -
  WR51_RS20160 (WR51_20645) kre 4084352..4084810 (+) 459 WP_000804864.1 YkyB family protein Regulator
  WR51_RS20165 (WR51_20650) - 4084842..4085504 (-) 663 WP_000922465.1 YkyA family protein -
  WR51_RS20170 (WR51_20655) - 4086118..4086771 (-) 654 WP_053563727.1 diguanylate cyclase domain-containing protein -
  WR51_RS20175 (WR51_20660) - 4086935..4087168 (+) 234 WP_000939446.1 SPP1 phage holin family protein -
  WR51_RS20180 (WR51_20665) - 4087201..4087701 (-) 501 WP_063548523.1 hypothetical protein -
  WR51_RS20185 (WR51_20670) - 4088113..4089654 (+) 1542 WP_053563725.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17757.49 Da        Isoelectric Point: 10.6793

>NTDB_id=142944 WR51_RS20160 WP_000804864.1 4084352..4084810(+) (kre) [Bacillus cereus strain CMCC P0011]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=142944 WR51_RS20160 WP_000804864.1 4084352..4084810(+) (kre) [Bacillus cereus strain CMCC P0011]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCAGCTACTAATCCTAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAACGTTTGATTGCTGAAA
AAAAAGCAATTAAAGAAGGATTACATTTTTCTAGAAACCCACGTTTTAGCCAACAACAATCTGATGTCCTTATACGTTTA
GGCGATTATTTTTTCCACATCCCTCCTACGAAAGAAGATTTTCGAATTCTACCGCATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTGAAAC
AAGAAAAAAAATTAAGTGAACCTGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493

Multiple sequence alignment