Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | VT48_RS05080 | Genome accession | NZ_CP011150 |
| Coordinates | 1018710..1019288 (+) | Length | 192 a.a. |
| NCBI ID | WP_017366958.1 | Uniprot ID | A0A5D4P9G2 |
| Organism | Bacillus altitudinis strain W3 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1013710..1024288
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VT48_RS05060 (VT48_05060) | - | 1014203..1015564 (-) | 1362 | WP_370539267.1 | globin-coupled sensor protein | - |
| VT48_RS05065 (VT48_05065) | - | 1015590..1017122 (-) | 1533 | WP_046343104.1 | FAD-dependent oxidoreductase | - |
| VT48_RS05070 (VT48_05070) | - | 1017265..1018125 (+) | 861 | WP_046343106.1 | SDR family oxidoreductase | - |
| VT48_RS05075 (VT48_05075) | - | 1018184..1018420 (-) | 237 | WP_008348804.1 | IDEAL domain-containing protein | - |
| VT48_RS05080 (VT48_05080) | comK | 1018710..1019288 (+) | 579 | WP_017366958.1 | competence protein ComK | Regulator |
| VT48_RS05085 (VT48_05085) | - | 1019432..1020538 (+) | 1107 | WP_046344949.1 | D-TA family PLP-dependent enzyme | - |
| VT48_RS05090 (VT48_05090) | - | 1020840..1021322 (+) | 483 | WP_046343108.1 | hypothetical protein | - |
| VT48_RS05095 (VT48_05095) | - | 1021353..1022792 (-) | 1440 | WP_025207099.1 | PLP-dependent aminotransferase family protein | - |
| VT48_RS05100 (VT48_05100) | - | 1022936..1024105 (+) | 1170 | WP_017360232.1 | MFS transporter | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22348.40 Da Isoelectric Point: 8.7996
>NTDB_id=142816 VT48_RS05080 WP_017366958.1 1018710..1019288(+) (comK) [Bacillus altitudinis strain W3]
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHIFQESSLGDTVVTFTNEQSVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHIFQESSLGDTVVTFTNEQSVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
Nucleotide
Download Length: 579 bp
>NTDB_id=142816 VT48_RS05080 WP_017366958.1 1018710..1019288(+) (comK) [Bacillus altitudinis strain W3]
GTGTCAGGAATTAGTGAAACACCATTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCGGTTGAAGAAGG
AAAACGAGTATATTCAAAAGTGATCGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCGCTGCAAATTATAGAACGCA
GTTGCAGGTTCTTTGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATACGAAGTAACAGGAATTTCCCACAAGCCTCCC
ATCGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACCTATTCATCCAACCGCCCTCAATGCGGATGGATCTCCCA
CAAATACATTCATATCTTTCAGGAATCATCCCTCGGAGACACGGTTGTTACTTTTACAAATGAGCAATCGGTCAAACTAG
ATGTCTCATATAAGTCATTTGAGAGTCAGGTACACCGAACAGCGTATCTTCGAACGAAATTTCAAGATCGACTTGATGGA
GGTCTTCCTAAGAAACAAGAATTTATGCTGTATCCAAAGGAACAGCAGCTCAACCTTGTGTATGATTTTATCTTAAGAGA
ACTTCGTAATCGTTATTAG
GTGTCAGGAATTAGTGAAACACCATTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCGGTTGAAGAAGG
AAAACGAGTATATTCAAAAGTGATCGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCGCTGCAAATTATAGAACGCA
GTTGCAGGTTCTTTGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATACGAAGTAACAGGAATTTCCCACAAGCCTCCC
ATCGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACCTATTCATCCAACCGCCCTCAATGCGGATGGATCTCCCA
CAAATACATTCATATCTTTCAGGAATCATCCCTCGGAGACACGGTTGTTACTTTTACAAATGAGCAATCGGTCAAACTAG
ATGTCTCATATAAGTCATTTGAGAGTCAGGTACACCGAACAGCGTATCTTCGAACGAAATTTCAAGATCGACTTGATGGA
GGTCTTCCTAAGAAACAAGAATTTATGCTGTATCCAAAGGAACAGCAGCTCAACCTTGTGTATGATTTTATCTTAAGAGA
ACTTCGTAATCGTTATTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
61.458 |
100 |
0.615 |