Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   FORC13_RS06360 Genome accession   NZ_CP011145
Coordinates   1142602..1143060 (-) Length   152 a.a.
NCBI ID   WP_000804864.1    Uniprot ID   -
Organism   Bacillus cereus strain FORC_013     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1137602..1148060
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FORC13_RS06335 (FORC13_1149) - 1137758..1139299 (-) 1542 WP_000449912.1 MDR family MFS transporter -
  FORC13_RS06340 (FORC13_1150) - 1139711..1140211 (+) 501 WP_000708120.1 hypothetical protein -
  FORC13_RS06345 (FORC13_1151) - 1140243..1140476 (-) 234 WP_000939448.1 SPP1 phage holin family protein -
  FORC13_RS06350 (FORC13_1152) - 1140640..1141293 (+) 654 WP_000680820.1 diguanylate cyclase -
  FORC13_RS06355 (FORC13_1153) - 1141908..1142570 (+) 663 WP_000922498.1 YkyA family protein -
  FORC13_RS06360 (FORC13_1154) kre 1142602..1143060 (-) 459 WP_000804864.1 YkyB family protein Regulator
  FORC13_RS06365 (FORC13_1155) - 1143202..1144776 (+) 1575 WP_002198132.1 Ppx/GppA family phosphatase -
  FORC13_RS06370 (FORC13_1156) - 1144886..1146994 (+) 2109 WP_059303478.1 polyphosphate kinase -
  FORC13_RS06375 (FORC13_1157) - 1147156..1147392 (-) 237 WP_000283738.1 hypothetical protein -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17757.49 Da        Isoelectric Point: 10.6793

>NTDB_id=142728 FORC13_RS06360 WP_000804864.1 1142602..1143060(-) (kre) [Bacillus cereus strain FORC_013]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=142728 FORC13_RS06360 WP_000804864.1 1142602..1143060(-) (kre) [Bacillus cereus strain FORC_013]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCAGCTACTAATCCTAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAACGTTTGATTGCTGAAA
AAAAAGCAATTAAAGAAGGATTGCATTTTTCTAGAAACCCACGTTTTAGCCAACAACAATCTGATGTCCTTATACGTTTA
GGCGATTATTTTTTCCACATCCCTCCTACGAAAGAAGATTTTCGAATTCTACCGCATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTAAAAC
AAGAAAAAAAATTAAGTGAGCCTGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493

Multiple sequence alignment