Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LG3211_RS17850 Genome accession   NZ_CP011131
Coordinates   4399144..4399542 (-) Length   132 a.a.
NCBI ID   WP_031372856.1    Uniprot ID   A0AAU8MXI9
Organism   Lysobacter gummosus strain 3.2.11     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4394144..4404542
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LG3211_RS17835 (LG3211_3935) - 4396129..4398147 (-) 2019 WP_057943998.1 methyl-accepting chemotaxis protein -
  LG3211_RS17840 (LG3211_3936) - 4398203..4398748 (-) 546 WP_057945570.1 chemotaxis protein CheW -
  LG3211_RS17845 (LG3211_3937) - 4398759..4399124 (-) 366 WP_057943999.1 response regulator -
  LG3211_RS17850 (LG3211_3938) pilG 4399144..4399542 (-) 399 WP_031372856.1 twitching motility response regulator PilG Regulator
  LG3211_RS17855 (LG3211_3939) gshB 4399874..4400836 (+) 963 WP_057944000.1 glutathione synthase -
  LG3211_RS17860 (LG3211_3940) - 4400833..4401714 (+) 882 WP_057944001.1 energy transducer TonB -
  LG3211_RS17865 (LG3211_3941) - 4401791..4402807 (+) 1017 WP_057944002.1 cytochrome c peroxidase -
  LG3211_RS25880 - 4403378..4403854 (-) 477 WP_148648992.1 hypothetical protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14822.24 Da        Isoelectric Point: 7.1364

>NTDB_id=142633 LG3211_RS17850 WP_031372856.1 4399144..4399542(-) (pilG) [Lysobacter gummosus strain 3.2.11]
MLDEVRSGSLDGLRVMVIDDSKTIRRTAETLLKREGCEVVTAIDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIKN
NQLFKGTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLDAIRKHVHA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=142633 LG3211_RS17850 WP_031372856.1 4399144..4399542(-) (pilG) [Lysobacter gummosus strain 3.2.11]
ATGCTCGACGAGGTTCGTAGCGGCAGCCTCGATGGTCTCAGGGTCATGGTGATCGACGATTCCAAGACCATCCGTCGAAC
CGCCGAGACGCTGTTGAAACGCGAAGGATGCGAGGTGGTCACGGCCATCGACGGGTTCGAAGCGTTGGCGAAGATCGCCG
ACCAGCAGCCACAGATCATTTTCGTGGATATCATGATGCCGCGTCTGGACGGCTATCAGACCTGTGCGCTCATCAAGAAC
AATCAATTGTTCAAGGGCACGCCGGTCATCATGCTGTCGTCCAAGGACGGTCTGTTCGACAAGGCGAGGGGTCGCATCGT
CGGCTCCGAGCAATATCTGACCAAGCCTTTTACGCGCGAGGAACTCCTCGACGCGATTCGCAAGCACGTACACGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.194

93.939

0.697

Multiple sequence alignment