Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   O7A_RS17260 Genome accession   NZ_CP011115
Coordinates   3256009..3256908 (-) Length   299 a.a.
NCBI ID   WP_003243039.1    Uniprot ID   G9LQ79
Organism   Bacillus subtilis KCTC 1028 = ATCC 6051a strain KCTC 1028     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3251009..3261908
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O7A_RS17225 (O7A_17225) mrpE 3251250..3251726 (+) 477 WP_003244015.1 Na+/H+ antiporter subunit E -
  O7A_RS17230 (O7A_17230) mrpF 3251726..3252010 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  O7A_RS17235 (O7A_17235) mnhG 3251994..3252368 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  O7A_RS17240 (O7A_17240) yuxO 3252407..3252787 (-) 381 WP_003228810.1 hotdog fold thioesterase -
  O7A_RS17245 (O7A_17245) comA 3252806..3253450 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  O7A_RS17250 (O7A_17250) comP 3253531..3255839 (-) 2309 Protein_3326 two-component system sensor histidine kinase ComP -
  O7A_RS17255 (O7A_17255) comX 3255854..3256021 (-) 168 WP_003242801.1 competence pheromone ComX Regulator
  O7A_RS17260 (O7A_17260) comQ 3256009..3256908 (-) 900 WP_003243039.1 ComX modifying isoprenyl transferase ComQ Regulator
  O7A_RS17265 (O7A_17265) degQ 3257093..3257233 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  O7A_RS23565 - 3257455..3257580 (+) 126 WP_003228793.1 hypothetical protein -
  O7A_RS17270 (O7A_17270) - 3257694..3258062 (+) 369 WP_003243784.1 hypothetical protein -
  O7A_RS17275 (O7A_17275) pdeH 3258038..3259267 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  O7A_RS17280 (O7A_17280) pncB 3259404..3260876 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  O7A_RS17285 (O7A_17285) pncA 3260892..3261443 (-) 552 WP_003243099.1 isochorismatase family cysteine hydrolase -

Sequence


Protein


Download         Length: 299 a.a.        Molecular weight: 34218.11 Da        Isoelectric Point: 4.8304

>NTDB_id=142467 O7A_RS17260 WP_003243039.1 3256009..3256908(-) (comQ) [Bacillus subtilis KCTC 1028 = ATCC 6051a strain KCTC 1028]
MKEIVEQNIFNEDLSQLLYSFIDSKETFSFAESTILHYVVFGGENLDVATRLGAGIEILILSSDIMDDLEDEDNHHALWM
KINRSESLNAALSLYTVGLTSIYSLNNNPLIFKYVLKYVNEAMQGQHDDITNKSKTEDESLEVIRLKCGSLIALANVAGV
LLATGEYNETVERYSYYKGIIAQISGDYYVLLSGNRSDIEKNKHTLIYLYLKRLFNDASEDLLYLISHKDLYYKSLLDKE
KFQEKLIKAGVTQYISVLLEIYKQKCISAIEQLNLDKEKKELIKECLLSYTKGDTRCKT

Nucleotide


Download         Length: 900 bp        

>NTDB_id=142467 O7A_RS17260 WP_003243039.1 3256009..3256908(-) (comQ) [Bacillus subtilis KCTC 1028 = ATCC 6051a strain KCTC 1028]
ATGAAGGAGATTGTGGAGCAAAACATATTTAACGAGGATTTGTCACAACTTCTTTACTCATTTATTGATTCTAAAGAAAC
ATTCTCCTTTGCTGAATCCACAATCTTACATTATGTTGTTTTTGGAGGGGAGAATTTAGATGTTGCAACAAGGCTTGGCG
CGGGAATAGAAATTCTTATTCTTTCATCAGATATTATGGATGATCTTGAAGATGAAGATAATCACCATGCATTATGGATG
AAAATTAATCGCTCGGAGTCGTTAAATGCAGCACTTTCCTTGTATACAGTAGGATTAACGAGTATTTATTCATTAAATAA
CAATCCTCTAATTTTTAAATATGTTTTAAAATACGTAAACGAGGCCATGCAAGGTCAACATGACGATATCACTAATAAAT
CTAAAACAGAAGATGAAAGTTTAGAAGTAATTAGATTAAAATGTGGAAGTCTGATTGCACTAGCAAATGTAGCAGGTGTT
TTATTGGCTACAGGAGAATATAATGAAACAGTTGAAAGATATTCCTACTATAAAGGGATTATAGCTCAAATTTCTGGAGA
TTATTATGTTCTTTTATCCGGAAATCGCAGTGATATTGAAAAAAACAAACATACACTGATTTACTTATATCTTAAGCGCC
TTTTTAATGATGCTTCGGAAGATTTATTATACTTAATTTCACATAAAGACTTATATTATAAATCGTTACTTGATAAAGAG
AAATTCCAAGAAAAATTAATTAAAGCGGGAGTTACTCAATACATTTCGGTATTATTGGAAATATATAAACAGAAATGTAT
TTCTGCTATAGAACAATTAAATTTAGATAAAGAAAAAAAAGAGCTAATAAAGGAATGCTTATTAAGTTATACAAAGGGGG
ATACAAGATGCAAGACCTAA

Domains


Predicted by InterproScan.

(44-218)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G9LQ79

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment