Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   bslm_RS07380 Genome accession   NZ_CP011101
Coordinates   1451685..1452149 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus sp. LM 4-2     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1446685..1457149
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  bslm_RS07365 (BsLM_1488) kinA 1447152..1448972 (+) 1821 WP_046380991.1 sporulation histidine kinase KinA -
  bslm_RS07370 (BsLM_1489) - 1448982..1450163 (-) 1182 WP_003232415.1 aminotransferase A -
  bslm_RS20615 (BsLM_1490) - 1450365..1450526 (-) 162 WP_003245246.1 hypothetical protein -
  bslm_RS07375 (BsLM_1491) cheV 1450730..1451641 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  bslm_RS07380 (BsLM_1492) kre 1451685..1452149 (-) 465 WP_003232406.1 YkyB family protein Regulator
  bslm_RS07385 (BsLM_1493) - 1452275..1453567 (-) 1293 WP_046380992.1 MFS transporter -
  bslm_RS07390 (BsLM_1494) - 1453643..1454137 (-) 495 WP_072557193.1 L,D-transpeptidase family protein -
  bslm_RS07395 (BsLM_1495) - 1454194..1455054 (-) 861 WP_017697271.1 metallophosphoesterase -
  bslm_RS07400 (BsLM_1496) fadH 1455197..1455961 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=142182 bslm_RS07380 WP_003232406.1 1451685..1452149(-) (kre) [Bacillus sp. LM 4-2]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=142182 bslm_RS07380 WP_003232406.1 1451685..1452149(-) (kre) [Bacillus sp. LM 4-2]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment