Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   bslm_RS05975 Genome accession   NZ_CP011101
Coordinates   1184597..1184788 (+) Length   63 a.a.
NCBI ID   WP_046380930.1    Uniprot ID   A0AA96V089
Organism   Bacillus sp. LM 4-2     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1179597..1189788
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  bslm_RS05945 (BsLM_1175) argF 1180461..1181420 (+) 960 WP_014479432.1 ornithine carbamoyltransferase -
  bslm_RS05950 (BsLM_1176) - 1181506..1181685 (+) 180 WP_003245356.1 YjzC family protein -
  bslm_RS05955 (BsLM_1177) - 1181731..1181916 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  bslm_RS05960 (BsLM_1178) - 1182165..1182899 (+) 735 WP_014479433.1 hypothetical protein -
  bslm_RS05965 (BsLM_1180) - 1182981..1183538 (+) 558 WP_014479435.1 hypothetical protein -
  bslm_RS05970 (BsLM_1181) med 1183629..1184582 (+) 954 WP_003245494.1 transcriptional regulator Med Regulator
  bslm_RS05975 (BsLM_1182) comZ 1184597..1184788 (+) 192 WP_046380930.1 ComG operon transcriptional repressor ComZ Regulator
  bslm_RS05980 (BsLM_1183) yjzB 1184818..1185057 (-) 240 WP_082098075.1 spore coat protein YjzB -
  bslm_RS05985 (BsLM_1184) fabH 1185222..1186160 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  bslm_RS05990 (BsLM_1185) fabF 1186183..1187424 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  bslm_RS05995 (BsLM_1186) - 1187500..1188285 (+) 786 WP_003232967.1 DUF2268 domain-containing protein -
  bslm_RS06000 (BsLM_1187) appD 1188477..1189463 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7282.31 Da        Isoelectric Point: 4.2564

>NTDB_id=142174 bslm_RS05975 WP_046380930.1 1184597..1184788(+) (comZ) [Bacillus sp. LM 4-2]
MQHEKSLEFLQIAMKYFPEAKEQFEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=142174 bslm_RS05975 WP_046380930.1 1184597..1184788(+) (comZ) [Bacillus sp. LM 4-2]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATTTCCCTGAAGCGAAAGAACAGTTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

96.825

100

0.968

Multiple sequence alignment