Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   bslm_RS04475 Genome accession   NZ_CP011101
Coordinates   901203..901997 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus sp. LM 4-2     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 896203..906997
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  bslm_RS04450 (BsLM_0881) - 897042..898073 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  bslm_RS04455 (BsLM_0882) - 898188..899069 (+) 882 WP_046380867.1 PhzF family phenazine biosynthesis isomerase -
  bslm_RS04460 (BsLM_0883) - 899157..899741 (+) 585 WP_032723010.1 nitroreductase -
  bslm_RS04465 (BsLM_0884) - 899780..899971 (-) 192 WP_003233561.1 YfhD family protein -
  bslm_RS20480 (BsLM_0885) - 900038..900148 (-) 111 WP_003223230.1 YfhE family protein -
  bslm_RS04470 (BsLM_0886) - 900203..901114 (-) 912 WP_033883295.1 TIGR01777 family oxidoreductase -
  bslm_RS04475 (BsLM_0887) recX 901203..901997 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  bslm_RS04480 (BsLM_0888) - 901999..902313 (+) 315 WP_003244592.1 YfhH family protein -
  bslm_RS04485 (BsLM_0889) - 902456..903649 (+) 1194 WP_003243500.1 MFS transporter -
  bslm_RS04490 (BsLM_0890) - 903681..903833 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  bslm_RS04495 (BsLM_0891) - 903958..904227 (+) 270 WP_015252516.1 YfhJ family protein -
  bslm_RS04500 (BsLM_0892) - 904372..904890 (+) 519 WP_029317456.1 SH3 domain-containing protein -
  bslm_RS04505 (BsLM_0893) spdL 904975..905292 (+) 318 WP_038428649.1 SdpC immunity protein SpdL -
  bslm_RS04510 (BsLM_0894) ephM 905294..906154 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=142165 bslm_RS04475 WP_029726844.1 901203..901997(+) (recX) [Bacillus sp. LM 4-2]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=142165 bslm_RS04475 WP_029726844.1 901203..901997(+) (recX) [Bacillus sp. LM 4-2]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTTTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment