Detailed information NTG0142115

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: AVM03_RS00285
• Genome accession: NZ_CP013727
• Coordinates: 52697..53857 (+)
• Length: 386 a.a.
• NCBI ID: WP_058905934.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain MBE1283
• Function: homologous recombination; DNA uptake (predicted from homology) Homologous recombination DNA binding and uptake

Genomic Context

Location: 47697..58857

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AVM03_RS00260 (AVM03_00260)	-	48443..49630 (+)	1188	WP_058905933.1	putative glycoside hydrolase	-
AVM03_RS00265 (AVM03_00265)	-	49748..50326 (+)	579	WP_003155035.1	GNAT family N-acetyltransferase	-
AVM03_RS00270 (AVM03_00270)	spx	50505..50900 (+)	396	WP_003155034.1	transcriptional regulator Spx	-
AVM03_RS00275 (AVM03_00275)	-	50958..51614 (-)	657	WP_057080091.1	TerC family protein	-
AVM03_RS00280 (AVM03_00280)	mecA	51890..52546 (+)	657	WP_003155032.1	adaptor protein MecA	Regulator
AVM03_RS00285 (AVM03_00285)	coiA	52697..53857 (+)	1161	WP_058905934.1	competence protein CoiA family protein	Machinery gene
AVM03_RS00290 (AVM03_00290)	pepF	54085..55914 (+)	1830	WP_024085125.1	oligoendopeptidase F	Regulator
AVM03_RS20200	-	55952..56119 (-)	168	WP_003155026.1	hypothetical protein	-
AVM03_RS00295 (AVM03_00295)	spxH	56405..57307 (-)	903	WP_024085126.1	protease adaptor protein SpxH	-
AVM03_RS00300 (AVM03_00300)	-	57304..57702 (-)	399	WP_003155023.1	thiol management oxidoreductase	-
AVM03_RS00305 (AVM03_00305)	-	57931..58617 (-)	687	WP_024085127.1	lytic transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 386 a.a.
• Molecular weight: 44303.03 Da
• Isoelectric Point: 9.9780

>NTDB_id=142115 AVM03_RS00285 WP_058905934.1 52697..53857(+) (coiA) [Bacillus amyloliquefaciens strain MBE1283]
MFSAVTAGGRLIQLAGSYSKEKAAELRKKRWFCPVCKSELDIKLGREKLPHFAHKKSRLCPGESEPESEYHLEGKRQLFL
WLKTQGCSVSLEPYLTSAGQQPDLTAESGEERLAFEFQCANLSADSLKSRTAGLKNAGYRPVWIIGAKRLKRMAAQFFRL
SAFHWQFFEVNSFSSLMFYCPDARSFYRLHSITPFYTGYSYAGLTAIPLHKANLKDICHPEGRHSVRLSSWGRAVAGFRN
KDGRFLSEDAGLIRRLFYERHQVAFPFLPSEVFIPVSAGFVFASPVFVWQGHLYLRLAELSKKGAPIRLSGMVHDLRQKI
RHKEIRMRYGSQDSLIGMAVKQYADFLCLQDFLREIENEVYMPSSQQKRPQTAEELRRRDLLFFGE

Nucleotide

• Length: 1161 bp

>NTDB_id=142115 AVM03_RS00285 WP_058905934.1 52697..53857(+) (coiA) [Bacillus amyloliquefaciens strain MBE1283]
ATGTTCAGTGCAGTGACTGCCGGCGGACGGCTCATTCAGCTGGCCGGAAGCTATTCAAAGGAAAAAGCGGCGGAGCTGAG
AAAGAAACGCTGGTTCTGCCCCGTTTGCAAAAGTGAGCTTGATATCAAACTGGGACGCGAAAAACTGCCGCACTTCGCTC
ATAAAAAAAGCAGGCTGTGTCCCGGGGAATCCGAACCTGAAAGCGAATACCATCTGGAAGGAAAAAGACAGCTTTTTCTC
TGGCTGAAGACACAAGGGTGCAGTGTCAGCCTGGAACCGTATCTGACTTCCGCTGGACAGCAGCCTGACTTGACGGCAGA
AAGCGGAGAAGAAAGGCTGGCTTTTGAATTTCAATGTGCGAACCTTTCGGCGGACTCTTTAAAGAGCCGGACGGCAGGCC
TGAAAAACGCCGGGTACCGGCCGGTCTGGATCATTGGGGCAAAACGGTTAAAACGGATGGCCGCGCAATTTTTCCGGCTT
TCTGCTTTTCACTGGCAGTTCTTTGAAGTCAATTCATTTTCCTCCTTAATGTTTTACTGCCCCGACGCCCGCTCCTTTTA
CAGGCTGCATTCCATCACTCCGTTTTACACCGGCTATTCTTATGCCGGCTTAACCGCAATCCCTCTTCACAAAGCAAACC
TGAAAGACATTTGTCATCCGGAAGGGCGGCACAGCGTCAGACTTTCCTCGTGGGGGCGTGCCGTTGCCGGCTTCCGCAAC
AAAGACGGGCGGTTTTTATCTGAAGATGCCGGTCTTATCCGGCGTCTTTTTTACGAAAGACATCAGGTTGCATTTCCATT
TCTCCCCTCTGAAGTGTTTATTCCCGTTTCAGCAGGCTTTGTGTTTGCAAGTCCCGTTTTTGTGTGGCAGGGCCATTTAT
ACTTGCGGCTTGCGGAACTTTCTAAAAAAGGCGCGCCGATCCGATTATCCGGCATGGTTCATGATTTACGGCAAAAAATC
AGGCATAAGGAGATCCGGATGCGGTATGGTTCACAAGACAGCCTTATCGGAATGGCGGTAAAACAATATGCTGATTTCTT
ATGCTTGCAGGATTTTTTAAGGGAAATTGAGAATGAAGTATATATGCCCTCATCTCAACAGAAGCGCCCTCAAACGGCAG
AAGAGCTGCGCCGGCGGGACCTGCTCTTTTTTGGGGAATGA

Domains

Predicted by InterProScan.

• Competence protein CoiA-like family (CoiA_nuc) (1-362)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Bacillus subtilis subsp. subtilis str. 168	46.011	97.409	0.448