Detailed information NTG0142022

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: AzCIB_RS03025
• Genome accession: NZ_CP011072
• Coordinates: 703595..704662 (+)
• Length: 355 a.a.
• NCBI ID: WP_050414531.1
• Uniprot ID: -
• Organism: Azoarcus sp. CIB
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 698595..709662

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AzCIB_RS03000 (AzCIB_0604)	-	699370..699621 (-)	252	WP_050414528.1	YfhL family 4Fe-4S dicluster ferredoxin	-
AzCIB_RS03005 (AzCIB_0605)	coaD	699639..700127 (-)	489	WP_050414529.1	pantetheine-phosphate adenylyltransferase	-
AzCIB_RS03010 (AzCIB_0606)	rsmD	700127..700663 (-)	537	WP_050414530.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
AzCIB_RS03015 (AzCIB_0607)	-	700660..702075 (-)	1416	WP_157058411.1	pitrilysin family protein	-
AzCIB_RS03020 (AzCIB_0608)	-	702077..703453 (-)	1377	WP_083447126.1	pitrilysin family protein	-
AzCIB_RS03025 (AzCIB_0609)	pilA	703595..704662 (+)	1068	WP_050414531.1	signal recognition particle-docking protein FtsY	Machinery gene
AzCIB_RS03030 (AzCIB_0610)	-	704659..705321 (+)	663	WP_050414532.1	ATP-binding cassette domain-containing protein	-
AzCIB_RS03035 (AzCIB_0611)	ftsX	705318..706220 (+)	903	WP_050414533.1	permease-like cell division protein FtsX	-
AzCIB_RS03040 (AzCIB_0612)	-	706357..707487 (+)	1131	WP_050414534.1	radical SAM protein	-
AzCIB_RS03045 (AzCIB_0613)	-	707491..709203 (-)	1713	WP_050414535.1	PAS domain-containing hybrid sensor histidine kinase/response regulator	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 37531.02 Da
• Isoelectric Point: 5.5119

>NTDB_id=142022 AzCIB_RS03025 WP_050414531.1 703595..704662(+) (pilA) [Azoarcus sp. CIB]
MFGFLKKSPKPEPAAQPQAEPAPPAAVEAPPSASIPAPAAEPEVKRSWADRLKAGLSRTRQQIGGGLASLFGRRKIDEDL
LEELETTLLMADCGVDATQHLLDELRKRWKRDKLETADQLQGALAEELLAILAPLEQPLDVSGHSPYIIMIAGVNGSGKT
TSIGKLAKYFQLQGKSVLLAAGDTFRAAAREQLQTWGERNNVTVIAQEGGDAAAVIFDAINAAKARGIDVVLADTAGRLP
TQLHLMEEIAKVRRVIAKAEPSGPHEVLLVLDANIGQNALAQVKAFDASIGVTGLVVTKLDGTAKGGVVAAIARQYPRPL
RFIGVGEGIDDLQPFNAREFVDALFEPIAGAGGAA

Nucleotide

• Length: 1068 bp

>NTDB_id=142022 AzCIB_RS03025 WP_050414531.1 703595..704662(+) (pilA) [Azoarcus sp. CIB]
ATGTTTGGTTTCCTGAAGAAGTCCCCGAAGCCCGAACCGGCGGCGCAGCCGCAGGCGGAGCCCGCGCCCCCGGCCGCAGT
CGAGGCGCCCCCGTCAGCGTCCATTCCGGCGCCCGCGGCCGAGCCGGAGGTCAAGCGCTCCTGGGCGGACCGCCTGAAGG
CGGGCCTGTCGCGCACACGGCAGCAGATCGGCGGCGGGCTCGCGAGCCTGTTCGGCCGGCGCAAGATCGACGAGGATCTG
CTCGAAGAACTCGAAACGACGCTGCTGATGGCCGACTGCGGCGTGGATGCGACGCAGCACCTGCTGGACGAGCTGCGCAA
GCGCTGGAAGCGTGACAAGCTCGAGACCGCGGACCAGCTGCAGGGGGCGCTTGCCGAGGAGCTCCTCGCGATCCTGGCCC
CGCTCGAGCAGCCGCTGGACGTTTCGGGGCATTCGCCCTACATCATCATGATCGCGGGTGTGAACGGCTCCGGGAAGACG
ACCTCGATCGGCAAGCTGGCGAAATACTTCCAGTTGCAGGGCAAGAGCGTGCTGCTCGCAGCCGGCGATACCTTCCGCGC
GGCGGCGCGCGAGCAGCTCCAGACCTGGGGCGAGCGCAACAACGTGACGGTGATCGCACAGGAAGGCGGCGACGCCGCGG
CGGTGATCTTCGACGCGATCAACGCGGCCAAGGCGCGCGGCATCGACGTCGTGCTGGCGGACACCGCGGGCCGGCTGCCG
ACGCAGCTCCACCTGATGGAGGAGATCGCGAAGGTGCGCCGCGTGATCGCGAAGGCCGAGCCGTCGGGGCCGCACGAGGT
GCTGCTGGTGCTCGACGCCAACATCGGCCAGAACGCGCTGGCGCAGGTGAAGGCCTTCGATGCGTCGATCGGTGTCACGG
GCCTCGTCGTCACGAAGCTCGATGGCACCGCGAAGGGCGGCGTCGTCGCGGCGATCGCGCGCCAGTATCCGCGTCCGCTG
CGCTTCATCGGCGTCGGCGAGGGCATCGACGACCTGCAGCCGTTCAATGCGCGCGAATTCGTCGATGCGCTGTTCGAGCC
CATCGCAGGAGCCGGCGGCGCGGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (147-345)

• SRP54-type protein, helical bundle domain (SRP54_N) (63-128)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	63.987	87.606	0.561