Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   AU077_RS04710 Genome accession   NZ_CP013688
Coordinates   941554..942216 (+) Length   220 a.a.
NCBI ID   WP_039670828.1    Uniprot ID   A0AA47FE38
Organism   Streptococcus gallolyticus strain ICDDRB-NRC-S1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 936554..947216
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AU077_RS04695 (AU077_04695) - 937408..938238 (+) 831 WP_014294542.1 xylose isomerase -
  AU077_RS04700 (AU077_04700) - 938733..939485 (+) 753 WP_058621648.1 ABC transporter ATP-binding protein -
  AU077_RS04705 (AU077_04705) - 939487..941466 (+) 1980 WP_058621649.1 FtsX-like permease family protein -
  AU077_RS04710 (AU077_04710) braR 941554..942216 (+) 663 WP_039670828.1 response regulator transcription factor Regulator
  AU077_RS04715 (AU077_04715) - 942213..943160 (+) 948 WP_014294538.1 sensor histidine kinase -
  AU077_RS04720 (AU077_04720) - 943243..943923 (+) 681 WP_058621650.1 LexA family transcriptional regulator -
  AU077_RS04725 (AU077_04725) xerS 944031..945101 (-) 1071 WP_014294536.1 tyrosine recombinase XerS Machinery gene
  AU077_RS11490 - 945577..945729 (-) 153 WP_223246280.1 hypothetical protein -
  AU077_RS11495 - 945857..946348 (-) 492 WP_223246279.1 hypothetical protein -
  AU077_RS11500 - 946455..946640 (-) 186 WP_223246284.1 ATP-binding cassette domain-containing protein -
  AU077_RS04735 (AU077_04735) - 946677..947018 (-) 342 WP_223246278.1 energy-coupling factor transporter transmembrane component T -

Sequence

Protein


Download         Length: 220 a.a.        Molecular weight: 25443.11 Da        Isoelectric Point: 4.9715

>NTDB_id=141940 AU077_RS04710 WP_039670828.1 941554..942216(+) (braR) [Streptococcus gallolyticus strain ICDDRB-NRC-S1]
MKQGKIYIVEDDETIVKLLKQHLSQSYDVFSVTNFRAIKQEVEEIKPDLILIDITLPYFNGFYWTTEIRKSMTLPIIFIS
SSDDEMDTVMALNMGGDDFVSKPFSLTILDAKISAFLRRAYQFTSDNYQLEHFSLSRDGILSNGDDHITLSPTENKILAI
LFEHQNQVVPKEELLEKLWENESFIDQNTLSVNITRLRKKTQPLGFDRIHTVRGVGYLIK

Nucleotide


Download         Length: 663 bp        

>NTDB_id=141940 AU077_RS04710 WP_039670828.1 941554..942216(+) (braR) [Streptococcus gallolyticus strain ICDDRB-NRC-S1]
ATGAAACAAGGAAAGATTTATATTGTCGAGGACGATGAAACTATTGTTAAACTTTTAAAACAACATCTTAGTCAAAGTTA
CGATGTCTTTAGTGTCACTAATTTTCGAGCTATTAAGCAGGAAGTCGAAGAAATCAAACCTGACCTTATCTTGATTGATA
TCACGTTGCCATATTTTAATGGTTTTTATTGGACAACAGAAATTCGTAAAAGCATGACATTGCCGATTATTTTTATCTCA
TCTAGTGATGATGAAATGGATACTGTCATGGCACTTAATATGGGAGGAGATGATTTTGTGTCAAAGCCATTTTCTCTAAC
GATTTTAGATGCCAAAATTTCAGCCTTTTTAAGACGTGCTTACCAGTTTACCTCGGATAATTACCAATTAGAACATTTTT
CTCTATCACGTGACGGGATTTTGTCAAACGGTGACGACCATATCACCCTATCTCCAACAGAAAATAAGATTTTAGCAATT
CTCTTTGAACATCAAAATCAAGTCGTTCCCAAAGAGGAATTACTCGAGAAGCTTTGGGAAAATGAAAGTTTCATTGACCA
AAACACCCTTAGTGTTAACATAACACGACTCCGCAAGAAAACACAACCATTAGGTTTTGATCGTATTCACACCGTGAGAG
GAGTTGGCTACCTTATAAAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(146-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA47FE38

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.872

99.091

0.455

Multiple sequence alignment