Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   AU077_RS03745 Genome accession   NZ_CP013688
Coordinates   743752..745566 (+) Length   604 a.a.
NCBI ID   WP_058621579.1    Uniprot ID   A0AA47IIS9
Organism   Streptococcus gallolyticus strain ICDDRB-NRC-S1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 738752..750566
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AU077_RS03715 (AU077_03715) queF 739297..739788 (+) 492 WP_014294723.1 preQ(1) synthase -
  AU077_RS03720 (AU077_03720) - 739844..740341 (-) 498 WP_014294722.1 DUF308 domain-containing protein -
  AU077_RS03725 (AU077_03725) gdhA 740587..741939 (+) 1353 WP_058621577.1 NADP-specific glutamate dehydrogenase -
  AU077_RS03730 (AU077_03730) - 742216..742725 (+) 510 WP_058621578.1 GNAT family N-acetyltransferase -
  AU077_RS03735 (AU077_03735) - 742722..743132 (+) 411 WP_014294719.1 peptide deformylase -
  AU077_RS03740 (AU077_03740) rcrR 743308..743748 (+) 441 WP_058622012.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  AU077_RS03745 (AU077_03745) rcrP 743752..745566 (+) 1815 WP_058621579.1 ABC transporter ATP-binding protein Regulator
  AU077_RS03750 (AU077_03750) rcrQ 745556..747328 (+) 1773 WP_014294716.1 ABC transporter ATP-binding protein Regulator
  AU077_RS03755 (AU077_03755) - 747594..748570 (+) 977 Protein_763 zinc-binding dehydrogenase -
  AU077_RS03760 (AU077_03760) - 748560..749012 (+) 453 WP_058621580.1 MarR family winged helix-turn-helix transcriptional regulator -
  AU077_RS03765 (AU077_03765) - 749002..749637 (+) 636 WP_058621581.1 ABC transporter permease -
  AU077_RS03770 (AU077_03770) - 749627..750547 (+) 921 WP_058621582.1 glycine betaine ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 67206.31 Da        Isoelectric Point: 6.4176

>NTDB_id=141932 AU077_RS03745 WP_058621579.1 743752..745566(+) (rcrP) [Streptococcus gallolyticus strain ICDDRB-NRC-S1]
MLKILKRLTAKEVIMLIFAVLFVCLNVYLELKIPDYMSNITTLLSTEGTKVKDIFAWNFDAPGMRMVLLSLGSFAASVVV
GFLAARIAASFSTRLRDDIFHSVLNFSDAEIKKFSIPSLLTRTTNDITQIQLVFTMGIQVITKGPIMAIWAITKIADKNH
EWLLVLIVAVAVMFLMIMFLLMMVMPKQRMIQRLTDKLNSVTRESLTGIRVVRAYNAEDYQDAKFAQVNDNVTNLNLFIG
RSMALLSPVMTGISSGMTLAIYWIGAHLIENIAIPTDPTKIASAMQDKVDLFSDMVVYSSYAMQVVIGLMMMIVVFFILP
RAVVAAGRINEVLETKPSIEYPETNQAKPTEKGSVEFDNVSFRYSKNSEAVLEHVSFKAKAGDTIAFIGSTGSGKSTLVN
LIPRFYDATEGTIKVDGIDVRQYDHDTLHKIVGYIPQKAVLFSGDIASNMDMGESNNSPLDDDKMWEALDLAQAKTFVEM
KDGKLKAPVAQGGQNFSGGQKQRLAIARALARKPEIIIFDDSFSALDYKTDRILRSQLKERTADMTKLIVAQRISTIMDA
DQILVLDEGRVVGQGTHEELLANNDVYREIAYSQLSKEELENGK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=141932 AU077_RS03745 WP_058621579.1 743752..745566(+) (rcrP) [Streptococcus gallolyticus strain ICDDRB-NRC-S1]
ATGTTAAAAATTTTGAAACGCTTAACAGCAAAAGAAGTTATAATGCTTATTTTTGCTGTATTATTTGTGTGTTTGAATGT
TTATCTTGAGTTGAAAATTCCAGATTATATGTCGAATATTACGACCTTGCTATCAACAGAAGGAACAAAAGTAAAAGATA
TTTTTGCTTGGAACTTTGATGCACCAGGTATGCGTATGGTCTTGCTTTCTTTGGGAAGCTTTGCAGCATCTGTTGTTGTC
GGTTTCCTAGCTGCTCGTATTGCGGCAAGTTTTAGTACACGCCTACGTGATGATATTTTCCATAGTGTCTTGAATTTTTC
AGATGCTGAAATCAAGAAATTTTCAATTCCTAGTCTTTTGACACGTACGACCAATGATATTACACAAATTCAATTGGTTT
TCACAATGGGAATCCAAGTCATTACTAAAGGACCTATCATGGCAATTTGGGCAATAACCAAGATTGCTGATAAAAATCAT
GAATGGTTATTGGTTCTTATCGTCGCAGTTGCAGTTATGTTCTTGATGATTATGTTCTTGTTGATGATGGTGATGCCTAA
GCAACGTATGATTCAAAGATTAACCGATAAATTGAACAGTGTTACGCGTGAATCATTGACAGGTATCCGTGTGGTGCGTG
CATACAATGCCGAAGATTATCAAGATGCCAAATTTGCACAAGTCAATGATAATGTTACCAATCTTAACCTCTTTATTGGA
CGTTCAATGGCGTTGTTATCTCCAGTAATGACAGGAATTTCAAGCGGAATGACACTTGCTATTTATTGGATTGGAGCGCA
TTTGATTGAAAATATTGCCATTCCGACAGACCCAACGAAAATTGCTAGCGCTATGCAAGATAAAGTTGATTTGTTTTCAG
ATATGGTTGTTTATTCATCATATGCCATGCAAGTTGTTATAGGATTAATGATGATGATTGTCGTATTCTTCATTTTACCT
CGTGCCGTTGTTGCTGCTGGGCGTATTAATGAAGTTCTTGAAACAAAACCTTCAATTGAATATCCAGAAACAAATCAAGC
TAAACCAACTGAAAAAGGTTCTGTTGAATTTGACAATGTTTCATTCCGTTACAGCAAAAATTCAGAAGCTGTTTTGGAAC
ACGTTTCCTTTAAAGCGAAAGCTGGAGACACGATTGCCTTTATCGGTTCAACTGGTTCTGGTAAATCAACGTTGGTGAAC
TTGATTCCACGTTTTTATGATGCGACAGAAGGAACGATTAAAGTCGATGGCATTGATGTTCGTCAATATGACCACGATAC
GCTTCATAAGATTGTTGGTTATATTCCGCAAAAAGCAGTGCTTTTTAGTGGGGATATCGCTTCAAATATGGATATGGGAG
AAAGCAATAACTCGCCACTTGATGATGACAAGATGTGGGAAGCTCTTGATTTAGCTCAAGCTAAGACATTCGTTGAAATG
AAAGACGGTAAGTTAAAAGCACCTGTTGCTCAAGGTGGTCAAAACTTCTCAGGTGGTCAAAAACAACGTTTGGCAATTGC
GCGTGCTCTTGCTCGTAAGCCTGAAATTATCATCTTTGATGATTCGTTCTCAGCACTTGACTACAAGACTGACCGAATCC
TTCGTTCACAGTTGAAAGAACGTACAGCTGATATGACAAAACTAATCGTGGCACAACGTATCTCAACGATTATGGACGCT
GACCAAATTTTGGTCTTGGATGAAGGTAGAGTTGTTGGTCAAGGTACGCACGAAGAATTGCTCGCAAACAACGATGTTTA
TCGTGAAATTGCTTACTCACAACTATCTAAGGAGGAATTAGAAAATGGAAAATAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(17-271)

ABC transporter (ABC_tran)

(372-522)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA47IIS9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

66.446

100

0.666

Multiple sequence alignment