Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   BIS30_RS21385 Genome accession   NZ_CP011051
Coordinates   2351059..2351199 (+) Length   46 a.a.
NCBI ID   WP_013307914.1    Uniprot ID   -
Organism   Bacillus spizizenii strain T30     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2346059..2356199
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BIS30_RS21380 srfAB 2347992..2350967 (+) 2976 Protein_2395 surfactin non-ribosomal peptide synthetase SrfAB -
  BIS30_RS21385 comS 2351059..2351199 (+) 141 WP_013307914.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5215.99 Da        Isoelectric Point: 8.5244

>NTDB_id=141823 BIS30_RS21385 WP_013307914.1 2351059..2351199(+) (comS) [Bacillus spizizenii strain T30]
MNRSGKHLISSIILYPQPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=141823 BIS30_RS21385 WP_013307914.1 2351059..2351199(+) (comS) [Bacillus spizizenii strain T30]
TTGAACCGATCAGGCAAGCACCTTATCAGCAGCATTATCCTGTATCCCCAGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTTTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978

Multiple sequence alignment