Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | BIS30_RS18910 | Genome accession | NZ_CP011051 |
| Coordinates | 3612956..3613849 (+) | Length | 297 a.a. |
| NCBI ID | WP_003220839.1 | Uniprot ID | E0TUA0 |
| Organism | Bacillus spizizenii strain T30 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 3594972..3635956 | 3612956..3613849 | within | 0 |
Gene organization within MGE regions
Location: 3594972..3635956
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BIS30_RS18815 (BIS30_18815) | smc | 3595673..3599233 (+) | 3561 | WP_003221570.1 | chromosome segregation protein SMC | - |
| BIS30_RS18820 (BIS30_18820) | ftsY | 3599253..3600242 (+) | 990 | WP_003221572.1 | signal recognition particle-docking protein FtsY | - |
| BIS30_RS18830 (BIS30_18830) | - | 3600377..3601476 (+) | 1100 | WP_230939496.1 | IS3 family transposase | - |
| BIS30_RS18835 (BIS30_18835) | - | 3601540..3602025 (-) | 486 | WP_003220807.1 | Ig-like domain-containing protein | - |
| BIS30_RS18840 (BIS30_18840) | - | 3602204..3602536 (+) | 333 | WP_003220809.1 | putative DNA-binding protein | - |
| BIS30_RS18845 (BIS30_18845) | ffh | 3602550..3603890 (+) | 1341 | WP_003220811.1 | signal recognition particle protein | - |
| BIS30_RS18850 (BIS30_18850) | rpsP | 3603996..3604268 (+) | 273 | WP_003220815.1 | 30S ribosomal protein S16 | - |
| BIS30_RS18855 (BIS30_18855) | - | 3604268..3604513 (+) | 246 | WP_003220817.1 | KH domain-containing protein | - |
| BIS30_RS18860 (BIS30_18860) | - | 3604635..3605021 (+) | 387 | WP_003220819.1 | YlqD family protein | - |
| BIS30_RS18865 (BIS30_18865) | rimM | 3605026..3605550 (+) | 525 | WP_003220821.1 | ribosome maturation factor RimM | - |
| BIS30_RS18870 (BIS30_18870) | trmD | 3605547..3606278 (+) | 732 | WP_003220823.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| BIS30_RS18875 (BIS30_18875) | rplS | 3606418..3606765 (+) | 348 | WP_003220825.1 | 50S ribosomal protein L19 | - |
| BIS30_RS18880 (BIS30_18880) | ylqF | 3606910..3607758 (+) | 849 | WP_003220827.1 | ribosome biogenesis GTPase YlqF | - |
| BIS30_RS18885 (BIS30_18885) | rnhB | 3607829..3608596 (+) | 768 | WP_003220829.1 | ribonuclease HII | - |
| BIS30_RS18890 (BIS30_18890) | - | 3608625..3610355 (+) | 1731 | WP_003220832.1 | hypothetical protein | - |
| BIS30_RS18895 (BIS30_18895) | - | 3610352..3610633 (+) | 282 | WP_003220834.1 | FlhB-like flagellar biosynthesis protein | - |
| BIS30_RS18900 (BIS30_18900) | sucC | 3610807..3611964 (+) | 1158 | WP_003220835.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| BIS30_RS18905 (BIS30_18905) | sucD | 3611993..3612895 (+) | 903 | WP_003220837.1 | succinate--CoA ligase subunit alpha | - |
| BIS30_RS18910 (BIS30_18910) | dprA | 3612956..3613849 (+) | 894 | WP_003220839.1 | DNA-processing protein DprA | Machinery gene |
| BIS30_RS18915 (BIS30_18915) | topA | 3614036..3616111 (+) | 2076 | WP_003220843.1 | type I DNA topoisomerase | - |
| BIS30_RS18920 (BIS30_18920) | trmFO | 3616187..3617494 (+) | 1308 | WP_003220844.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| BIS30_RS18925 (BIS30_18925) | xerC | 3617562..3618476 (+) | 915 | WP_003220846.1 | tyrosine recombinase XerC | - |
| BIS30_RS18930 (BIS30_18930) | clpQ | 3618489..3619034 (+) | 546 | WP_003220848.1 | ATP-dependent protease subunit ClpQ | - |
| BIS30_RS18935 (BIS30_18935) | hslU | 3619051..3620443 (+) | 1393 | Protein_3672 | HslU--HslV peptidase ATPase subunit | - |
| BIS30_RS18940 (BIS30_18940) | codY | 3620483..3621262 (+) | 780 | WP_003220850.1 | GTP-sensing pleiotropic transcriptional regulator CodY | Regulator |
| BIS30_RS18945 (BIS30_18945) | flgB | 3621643..3622032 (+) | 390 | WP_003220852.1 | flagellar basal body rod protein FlgB | - |
| BIS30_RS18950 (BIS30_18950) | flgC | 3622032..3622484 (+) | 453 | WP_003220854.1 | flagellar basal body rod protein FlgC | - |
| BIS30_RS18955 (BIS30_18955) | fliE | 3622496..3622816 (+) | 321 | WP_003238544.1 | flagellar hook-basal body complex protein FliE | - |
| BIS30_RS18960 (BIS30_18960) | fliF | 3622862..3624472 (+) | 1611 | WP_079996358.1 | flagellar basal-body MS-ring/collar protein FliF | - |
| BIS30_RS18965 (BIS30_18965) | fliG | 3624485..3625501 (+) | 1017 | WP_003220860.1 | flagellar motor switch protein FliG | - |
| BIS30_RS18970 (BIS30_18970) | fliH | 3625494..3626246 (+) | 753 | WP_003220862.1 | flagellar assembly protein FliH | - |
| BIS30_RS18975 (BIS30_18975) | fliI | 3626243..3627559 (+) | 1317 | WP_003220864.1 | flagellar protein export ATPase FliI | - |
| BIS30_RS18980 (BIS30_18980) | fliJ | 3627562..3628005 (+) | 444 | WP_003220866.1 | flagellar export protein FliJ | - |
| BIS30_RS18985 (BIS30_18985) | - | 3628017..3628631 (+) | 615 | WP_003220869.1 | MotE family protein | - |
| BIS30_RS18990 (BIS30_18990) | - | 3628643..3630106 (+) | 1464 | WP_003220871.1 | flagellar hook-length control protein FliK | - |
| BIS30_RS18995 (BIS30_18995) | flgD | 3630103..3630525 (+) | 423 | WP_003220873.1 | flagellar hook assembly protein FlgD | - |
| BIS30_RS19000 (BIS30_19000) | flgG | 3630547..3631341 (+) | 795 | WP_003220874.1 | flagellar basal body rod protein FlgG | - |
| BIS30_RS19005 (BIS30_19005) | swrD | 3631381..3631596 (+) | 216 | WP_003220876.1 | swarming motility protein SwrD | - |
| BIS30_RS19010 (BIS30_19010) | fliL | 3631593..3632018 (+) | 426 | WP_003220878.1 | flagellar basal body-associated protein FliL | - |
| BIS30_RS19015 (BIS30_19015) | fliM | 3632052..3633050 (+) | 999 | WP_003220879.1 | flagellar motor switch protein FliM | - |
| BIS30_RS19020 (BIS30_19020) | fliY | 3633040..3634179 (+) | 1140 | WP_003220881.1 | flagellar motor switch phosphatase FliY | - |
| BIS30_RS19025 (BIS30_19025) | cheY | 3634205..3634567 (+) | 363 | WP_003220882.1 | chemotaxis protein CheY | - |
| BIS30_RS19030 (BIS30_19030) | fliZ | 3634582..3635241 (+) | 660 | WP_003220884.1 | flagella biosynthesis regulatory protein FliZ | - |
| BIS30_RS19035 (BIS30_19035) | fliP | 3635234..3635899 (+) | 666 | WP_003220886.1 | flagellar type III secretion system pore protein FliP | - |
Sequence
Protein
Download Length: 297 a.a. Molecular weight: 32921.32 Da Isoelectric Point: 9.9037
>NTDB_id=141819 BIS30_RS18910 WP_003220839.1 3612956..3613849(+) (dprA) [Bacillus spizizenii strain T30]
MDQAAACLMICRINQLLSPSLLLKWWKADPSMSLTSPVLETVTRGKIKAAALKNKIEEQYPKLQRVLAAYHEQGINPIPI
SSKQYPFWLKTIYDPPAVLFAKGDLTLLSKGRKIGIVGTRNPTAYGIQIVNHLTKELCRKNWVIVSGLASGIDGMSHAAS
IKAKGRTIGVIAGGFQHIYPRENLQLADHMAKHHILLSEHPPETKPQKWHFPMRNRIISGLSEGVIVVQGKEKSGSLITA
YQALEQGREVFAVPGSLFDPYAGGPIKLIQQGAKAIWSAEDIFEELPERNVQYTEPF
MDQAAACLMICRINQLLSPSLLLKWWKADPSMSLTSPVLETVTRGKIKAAALKNKIEEQYPKLQRVLAAYHEQGINPIPI
SSKQYPFWLKTIYDPPAVLFAKGDLTLLSKGRKIGIVGTRNPTAYGIQIVNHLTKELCRKNWVIVSGLASGIDGMSHAAS
IKAKGRTIGVIAGGFQHIYPRENLQLADHMAKHHILLSEHPPETKPQKWHFPMRNRIISGLSEGVIVVQGKEKSGSLITA
YQALEQGREVFAVPGSLFDPYAGGPIKLIQQGAKAIWSAEDIFEELPERNVQYTEPF
Nucleotide
Download Length: 894 bp
>NTDB_id=141819 BIS30_RS18910 WP_003220839.1 3612956..3613849(+) (dprA) [Bacillus spizizenii strain T30]
TTGGATCAGGCCGCTGCCTGTTTAATGATTTGCAGAATCAATCAATTATTATCCCCATCCCTTCTATTAAAATGGTGGAA
AGCTGATCCGTCTATGTCGCTGACTTCACCCGTGTTAGAAACTGTTACTCGAGGTAAAATAAAGGCAGCTGCATTAAAAA
ATAAAATAGAAGAACAATATCCAAAGCTTCAGCGTGTACTTGCTGCTTACCATGAGCAAGGAATTAACCCCATCCCGATT
TCTTCAAAGCAATATCCTTTCTGGCTGAAAACCATTTATGATCCCCCCGCCGTCCTGTTTGCAAAGGGTGATTTGACCCT
TCTTTCTAAAGGGAGGAAAATTGGAATTGTAGGGACAAGAAATCCAACAGCTTATGGGATACAAATTGTCAATCATCTTA
CAAAAGAGCTTTGCCGTAAAAATTGGGTGATTGTCAGCGGACTGGCGTCTGGGATAGACGGAATGTCCCATGCTGCAAGT
ATTAAGGCGAAGGGGCGGACAATCGGCGTCATTGCGGGCGGATTTCAACACATATATCCCCGGGAAAACCTTCAGTTAGC
AGATCATATGGCTAAACACCATATCCTTCTGTCAGAGCACCCACCTGAAACCAAACCCCAAAAATGGCATTTCCCTATGA
GAAACCGTATCATTAGCGGATTAAGTGAAGGCGTTATTGTCGTGCAGGGCAAAGAAAAAAGTGGTTCGCTGATTACTGCA
TATCAAGCACTGGAACAAGGAAGAGAAGTATTTGCCGTACCCGGCTCATTATTTGATCCGTACGCAGGAGGTCCTATAAA
ACTGATCCAGCAGGGGGCTAAAGCCATATGGTCAGCAGAGGATATTTTCGAGGAGCTTCCTGAGAGAAACGTTCAATATA
CGGAACCCTTTTGA
TTGGATCAGGCCGCTGCCTGTTTAATGATTTGCAGAATCAATCAATTATTATCCCCATCCCTTCTATTAAAATGGTGGAA
AGCTGATCCGTCTATGTCGCTGACTTCACCCGTGTTAGAAACTGTTACTCGAGGTAAAATAAAGGCAGCTGCATTAAAAA
ATAAAATAGAAGAACAATATCCAAAGCTTCAGCGTGTACTTGCTGCTTACCATGAGCAAGGAATTAACCCCATCCCGATT
TCTTCAAAGCAATATCCTTTCTGGCTGAAAACCATTTATGATCCCCCCGCCGTCCTGTTTGCAAAGGGTGATTTGACCCT
TCTTTCTAAAGGGAGGAAAATTGGAATTGTAGGGACAAGAAATCCAACAGCTTATGGGATACAAATTGTCAATCATCTTA
CAAAAGAGCTTTGCCGTAAAAATTGGGTGATTGTCAGCGGACTGGCGTCTGGGATAGACGGAATGTCCCATGCTGCAAGT
ATTAAGGCGAAGGGGCGGACAATCGGCGTCATTGCGGGCGGATTTCAACACATATATCCCCGGGAAAACCTTCAGTTAGC
AGATCATATGGCTAAACACCATATCCTTCTGTCAGAGCACCCACCTGAAACCAAACCCCAAAAATGGCATTTCCCTATGA
GAAACCGTATCATTAGCGGATTAAGTGAAGGCGTTATTGTCGTGCAGGGCAAAGAAAAAAGTGGTTCGCTGATTACTGCA
TATCAAGCACTGGAACAAGGAAGAGAAGTATTTGCCGTACCCGGCTCATTATTTGATCCGTACGCAGGAGGTCCTATAAA
ACTGATCCAGCAGGGGGCTAAAGCCATATGGTCAGCAGAGGATATTTTCGAGGAGCTTCCTGAGAGAAACGTTCAATATA
CGGAACCCTTTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Bacillus subtilis subsp. subtilis str. 168 |
94.276 |
100 |
0.943 |